Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09315

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,117,378	+				-1.0
2,117,475	+				-0.3
2,117,502	-		HSERO_RS09315	0.12	+0.2
2,117,506	+		HSERO_RS09315	0.12	+0.0
2,117,533	-		HSERO_RS09315	0.17	-0.5
2,117,565	-		HSERO_RS09315	0.23	-1.0
2,117,565	-		HSERO_RS09315	0.23	-0.8
2,117,565	-		HSERO_RS09315	0.23	-1.0
2,117,747	-		HSERO_RS09315	0.55	+0.2
2,117,958	+				+0.4
2,118,177	-		HSERO_RS09320	0.14	+0.2
2,118,247	-		HSERO_RS09320	0.20	-0.1
2,118,294	+		HSERO_RS09320	0.23	-0.3
2,118,452	+				-1.2
2,118,508	-		HSERO_RS09320	0.40	-0.7
2,118,610	+		HSERO_RS09320	0.48	+0.3
2,118,618	-		HSERO_RS09320	0.49	-0.6
2,118,718	-		HSERO_RS09320	0.57	+0.4
2,118,846	-		HSERO_RS09320	0.67	+0.3
2,118,960	+		HSERO_RS09320	0.76	+1.5
2,118,982	+		HSERO_RS09320	0.78	-0.0