Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09305

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,115,196	-				+0.5
2,115,207	-				-0.2
2,115,242	+				+0.6
2,115,316	-				+0.8
2,115,395	-		HSERO_RS09300	0.27	-0.7
2,115,405	+		HSERO_RS09300	0.29	-0.7
2,115,443	-				+2.5
2,115,650	-		HSERO_RS09300	0.61	+0.1
2,115,676	-		HSERO_RS09300	0.65	+0.2
2,115,714	-		HSERO_RS09300	0.70	-0.1
2,115,982	+				-0.2
2,115,990	-				+0.1
2,117,378	+				-1.0
2,117,475	+				-0.3
2,117,502	-		HSERO_RS09315	0.12	+0.2
2,117,506	+		HSERO_RS09315	0.12	+0.0
2,117,533	-		HSERO_RS09315	0.17	-0.5
2,117,565	-		HSERO_RS09315	0.23	-1.0
2,117,565	-		HSERO_RS09315	0.23	-0.8
2,117,565	-		HSERO_RS09315	0.23	-1.0
2,117,747	-		HSERO_RS09315	0.55	+0.2