Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08740

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
1,981,560	+				+1.6
1,981,584	+		HSERO_RS08730	0.79	+0.1
1,981,606	+		HSERO_RS08730	0.80	+0.9
1,981,620	+		HSERO_RS08730	0.81	-0.8
1,981,675	-		HSERO_RS08730	0.85	-1.0
1,981,717	-		HSERO_RS08730	0.88	-1.0
1,981,977	-				-1.2
1,982,105	+		HSERO_RS08735	0.32	-0.3
1,982,147	+		HSERO_RS08735	0.42	-0.1
1,982,169	-		HSERO_RS08735	0.48	-0.1
1,982,175	+		HSERO_RS08735	0.50	-1.2
1,982,178	-		HSERO_RS08735	0.51	-2.3
1,982,308	+		HSERO_RS08735	0.84	+0.9
1,982,328	-		HSERO_RS08735	0.90	+3.3
1,982,542	+				+0.7
1,982,545	-				-0.4
1,982,550	-				-0.1
1,982,557	+				-0.1
1,982,570	-				-0.2
1,982,742	+		HSERO_RS08740	0.15	-0.5
1,982,756	+		HSERO_RS08740	0.16	-1.6
1,982,813	-		HSERO_RS08740	0.21	+0.3
1,983,209	-		HSERO_RS08740	0.50	-2.2
1,983,215	+		HSERO_RS08740	0.50	-0.6
1,983,307	+		HSERO_RS08740	0.57	+0.5
1,983,307	+		HSERO_RS08740	0.57	-1.0
1,983,606	-		HSERO_RS08740	0.79	-1.2
1,983,841	+				-0.5
1,983,892	-				+0.9
1,983,914	+				+0.7
1,983,914	+				+1.3
1,984,002	+				-0.1
1,984,002	+				+0.5
1,984,067	+		HSERO_RS08745	0.18	+1.2
1,984,222	-		HSERO_RS08745	0.47	-0.8
1,984,475	-				+0.7
1,984,505	+				-0.6