Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06505

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
1,477,650	-		HSERO_RS06500	0.67	-1.2
1,477,726	+		HSERO_RS06500	0.70	-2.4
1,477,844	+		HSERO_RS06500	0.75	-0.4
1,477,859	-		HSERO_RS06500	0.76	+0.1
1,477,992	-		HSERO_RS06500	0.82	+1.5
1,478,108	+		HSERO_RS06500	0.87	-0.2
1,478,116	-		HSERO_RS06500	0.87	+0.0
1,478,527	+				+0.1
1,478,626	+				-0.6
1,478,634	-				+1.2
1,478,669	+				-0.1
1,478,780	+				-0.4
1,478,904	+		HSERO_RS06505	0.19	-0.2
1,478,904	+		HSERO_RS06505	0.19	+1.0
1,478,913	+		HSERO_RS06505	0.20	+1.1
1,479,040	+		HSERO_RS06505	0.29	+0.8
1,479,118	-		HSERO_RS06505	0.35	-0.2
1,479,253	-		HSERO_RS06505	0.45	+0.4
1,479,421	-		HSERO_RS06505	0.58	-0.1
1,479,426	-		HSERO_RS06505	0.58	+0.6
1,479,451	-		HSERO_RS06505	0.60	+0.5
1,479,558	+		HSERO_RS06505	0.68	+0.4
1,479,876	-				+0.2
1,480,041	-				-0.2
1,480,152	-		HSERO_RS06510	0.23	-0.3
1,480,393	-		HSERO_RS06510	0.55	-1.3
1,480,403	-		HSERO_RS06510	0.56	+0.6
1,480,487	-				+3.3
1,480,502	-		HSERO_RS06510	0.69	+1.0
1,480,633	+		HSERO_RS06510	0.87	-0.1
1,480,655	+		HSERO_RS06510	0.90	+0.8
1,480,748	+				+0.2
1,480,785	+				-0.3
1,480,886	+				-0.8
1,480,963	-				+2.2