Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS06145 and HSERO_RS06150 are separated by 467 nucleotides HSERO_RS06150 and HSERO_RS06155 overlap by 4 nucleotides HSERO_RS06155 and HSERO_RS06160 are separated by 178 nucleotides
HSERO_RS06145: HSERO_RS06145 - NrdR family transcriptional regulator, at 1,383,047 to 1,383,526
_RS06145
HSERO_RS06150: HSERO_RS06150 - cell division protein ZapA, at 1,383,994 to 1,384,311
_RS06150
HSERO_RS06155: HSERO_RS06155 - BRLZ domain containing protein, at 1,384,308 to 1,384,538
_RS06155
HSERO_RS06160: HSERO_RS06160 - hypothetical protein, at 1,384,717 to 1,385,412
_RS06160
Position (kb)
1383
1384
1385 Strain fitness (log2 ratio)
-2
-1
0
1 at 1383.052 kb on - strand at 1383.342 kb on - strand, within HSERO_RS06145 at 1383.444 kb on - strand, within HSERO_RS06145 at 1383.557 kb on - strand at 1383.791 kb on + strand at 1383.793 kb on - strand at 1383.800 kb on + strand at 1383.808 kb on - strand at 1383.822 kb on + strand at 1383.899 kb on - strand at 1384.265 kb on + strand, within HSERO_RS06150 at 1384.265 kb on + strand, within HSERO_RS06150 at 1384.265 kb on + strand, within HSERO_RS06150 at 1384.265 kb on + strand, within HSERO_RS06150 at 1384.273 kb on - strand, within HSERO_RS06150 at 1384.273 kb on - strand, within HSERO_RS06150 at 1384.273 kb on - strand, within HSERO_RS06150 at 1384.273 kb on - strand, within HSERO_RS06150 at 1384.283 kb on - strand at 1384.651 kb on - strand at 1384.656 kb on - strand at 1384.661 kb on - strand at 1384.662 kb on + strand at 1384.682 kb on + strand at 1384.724 kb on + strand at 1384.734 kb on + strand at 1384.734 kb on - strand at 1384.754 kb on + strand at 1384.789 kb on + strand, within HSERO_RS06160 at 1384.926 kb on - strand, within HSERO_RS06160 at 1385.093 kb on + strand, within HSERO_RS06160 at 1385.245 kb on + strand, within HSERO_RS06160 at 1385.245 kb on + strand, within HSERO_RS06160 at 1385.262 kb on + strand, within HSERO_RS06160 at 1385.270 kb on - strand, within HSERO_RS06160
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 1,383,052 - +0.2 1,383,342 - HSERO_RS06145 0.61 +0.7 1,383,444 - HSERO_RS06145 0.83 -0.4 1,383,557 - -0.2 1,383,791 + +1.1 1,383,793 - -0.2 1,383,800 + +0.6 1,383,808 - -0.1 1,383,822 + +0.3 1,383,899 - +0.5 1,384,265 + HSERO_RS06150 0.85 -0.4 1,384,265 + HSERO_RS06150 0.85 -0.1 1,384,265 + HSERO_RS06150 0.85 -1.1 1,384,265 + HSERO_RS06150 0.85 -0.9 1,384,273 - HSERO_RS06150 0.88 +0.3 1,384,273 - HSERO_RS06150 0.88 -0.7 1,384,273 - HSERO_RS06150 0.88 +0.6 1,384,273 - HSERO_RS06150 0.88 -0.9 1,384,283 - +0.3 1,384,651 - -0.0 1,384,656 - +0.2 1,384,661 - -1.7 1,384,662 + +1.0 1,384,682 + +0.0 1,384,724 + +0.1 1,384,734 + +0.5 1,384,734 - +1.1 1,384,754 + +1.1 1,384,789 + HSERO_RS06160 0.10 +1.3 1,384,926 - HSERO_RS06160 0.30 +0.7 1,385,093 + HSERO_RS06160 0.54 -1.0 1,385,245 + HSERO_RS06160 0.76 -0.2 1,385,245 + HSERO_RS06160 0.76 -2.6 1,385,262 + HSERO_RS06160 0.78 +1.2 1,385,270 - HSERO_RS06160 0.79 -0.2
Or see this region's nucleotide sequence