Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06150

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
1,383,052	-				+0.2
1,383,342	-		HSERO_RS06145	0.61	+0.7
1,383,444	-		HSERO_RS06145	0.83	-0.4
1,383,557	-				-0.2
1,383,791	+				+1.1
1,383,793	-				-0.2
1,383,800	+				+0.6
1,383,808	-				-0.1
1,383,822	+				+0.3
1,383,899	-				+0.5
1,384,265	+		HSERO_RS06150	0.85	-0.4
1,384,265	+		HSERO_RS06150	0.85	-0.1
1,384,265	+		HSERO_RS06150	0.85	-1.1
1,384,265	+		HSERO_RS06150	0.85	-0.9
1,384,273	-		HSERO_RS06150	0.88	+0.3
1,384,273	-		HSERO_RS06150	0.88	-0.7
1,384,273	-		HSERO_RS06150	0.88	+0.6
1,384,273	-		HSERO_RS06150	0.88	-0.9
1,384,283	-				+0.3
1,384,651	-				-0.0
1,384,656	-				+0.2
1,384,661	-				-1.7
1,384,662	+				+1.0
1,384,682	+				+0.0
1,384,724	+				+0.1
1,384,734	+				+0.5
1,384,734	-				+1.1
1,384,754	+				+1.1
1,384,789	+		HSERO_RS06160	0.10	+1.3
1,384,926	-		HSERO_RS06160	0.30	+0.7
1,385,093	+		HSERO_RS06160	0.54	-1.0
1,385,245	+		HSERO_RS06160	0.76	-0.2
1,385,245	+		HSERO_RS06160	0.76	-2.6
1,385,262	+		HSERO_RS06160	0.78	+1.2
1,385,270	-		HSERO_RS06160	0.79	-0.2