Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01350 and HSERO_RS01355 are separated by 95 nucleotides HSERO_RS01355 and HSERO_RS01360 are separated by 348 nucleotides
HSERO_RS01350: HSERO_RS01350 - beta-galactosidase, at 289,392 to 291,368
_RS01350
HSERO_RS01355: HSERO_RS01355 - sugar ABC transporter ATP-binding protein, at 291,464 to 292,609
_RS01355
HSERO_RS01360: HSERO_RS01360 - LacI family transcription regulator, at 292,958 to 293,974
_RS01360
Position (kb) 291
292
293 Strain fitness (log2 ratio) -1
0
1
2 at 290.638 kb on - strand, within HSERO_RS01350 at 290.820 kb on - strand, within HSERO_RS01350 at 290.822 kb on - strand, within HSERO_RS01350 at 290.875 kb on - strand, within HSERO_RS01350 at 290.970 kb on + strand, within HSERO_RS01350 at 291.161 kb on + strand at 291.169 kb on - strand, within HSERO_RS01350 at 291.180 kb on - strand at 291.251 kb on - strand at 291.404 kb on - strand at 291.511 kb on - strand at 291.516 kb on - strand at 291.647 kb on + strand, within HSERO_RS01355 at 291.744 kb on + strand, within HSERO_RS01355 at 291.930 kb on - strand, within HSERO_RS01355 at 292.043 kb on - strand, within HSERO_RS01355 at 292.044 kb on + strand, within HSERO_RS01355 at 292.147 kb on + strand, within HSERO_RS01355 at 292.205 kb on - strand, within HSERO_RS01355 at 292.223 kb on - strand, within HSERO_RS01355 at 292.257 kb on + strand, within HSERO_RS01355 at 292.359 kb on - strand, within HSERO_RS01355 at 292.568 kb on + strand at 292.568 kb on + strand at 292.602 kb on - strand at 292.602 kb on - strand at 292.804 kb on - strand at 292.877 kb on + strand at 292.914 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 290,638 - HSERO_RS01350 0.63 +0.4 290,820 - HSERO_RS01350 0.72 -0.2 290,822 - HSERO_RS01350 0.72 +0.5 290,875 - HSERO_RS01350 0.75 +1.3 290,970 + HSERO_RS01350 0.80 -0.9 291,161 + +2.3 291,169 - HSERO_RS01350 0.90 +0.3 291,180 - +0.5 291,251 - +0.7 291,404 - -0.5 291,511 - -0.4 291,516 - -0.2 291,647 + HSERO_RS01355 0.16 -0.1 291,744 + HSERO_RS01355 0.24 +0.1 291,930 - HSERO_RS01355 0.41 -0.8 292,043 - HSERO_RS01355 0.51 +0.1 292,044 + HSERO_RS01355 0.51 -0.0 292,147 + HSERO_RS01355 0.60 +0.8 292,205 - HSERO_RS01355 0.65 -1.5 292,223 - HSERO_RS01355 0.66 +0.0 292,257 + HSERO_RS01355 0.69 -0.0 292,359 - HSERO_RS01355 0.78 +0.2 292,568 + +0.2 292,568 + -0.3 292,602 - +0.3 292,602 - -1.5 292,804 - -1.4 292,877 + +0.1 292,914 + -1.0
Or see this region's nucleotide sequence