Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS00245

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
62,174	+				-0.8
62,174	+				-0.4
62,174	+				+0.5
62,182	-				+0.1
62,182	-				-0.0
62,300	-		HSERO_RS00240	0.13	-1.4
62,364	+		HSERO_RS00240	0.20	-0.8
62,407	-		HSERO_RS00240	0.25	-0.8
62,562	+		HSERO_RS00240	0.42	-2.5
62,746	+		HSERO_RS00240	0.63	+0.4
62,871	+		HSERO_RS00240	0.77	-0.7
62,907	-		HSERO_RS00240	0.81	+1.1
63,054	-				+0.1
63,231	-		HSERO_RS00245	0.27	-0.8
63,300	+		HSERO_RS00245	0.42	-0.8
63,347	-		HSERO_RS00245	0.52	-0.0
63,347	-		HSERO_RS00245	0.52	-0.5
63,472	+		HSERO_RS00245	0.80	-0.1
63,518	+		HSERO_RS00245	0.90	-0.9
63,523	+				+0.8
63,541	+				+3.5
63,563	-				-0.7
63,724	+				-1.0
63,787	+				-0.5
63,794	+				-0.8
63,802	-				-0.8
63,802	-				-1.1
63,845	-				+1.3
63,919	-				-1.3
63,930	-				-1.3
63,967	+				-1.8
63,973	+				-0.2
63,975	-				+0.1
64,026	+				+0.1
64,034	-				+0.8
64,110	-				-0.4
64,120	-				+0.1
64,120	-				+0.6
64,143	-		HSERO_RS00250	0.19	+0.2
64,155	-		HSERO_RS00250	0.24	-2.4
64,190	+		HSERO_RS00250	0.38	-0.1
64,228	-		HSERO_RS00250	0.53	-2.4
64,284	+		HSERO_RS00250	0.75	+1.4
64,319	+		HSERO_RS00250	0.89	-1.7
64,335	+				-0.5
64,355	+				+0.7
64,390	+				-0.9
64,390	+				+0.1
64,395	+				+0.1
64,480	-				-0.7
64,507	-				+0.4
64,520	-				-0.6
64,536	-		HSERO_RS00255	0.11	+0.6
64,551	+		HSERO_RS00255	0.11	+0.5