Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00215 and HSERO_RS00220 are separated by 91 nucleotides HSERO_RS00220 and HSERO_RS00225 are separated by 472 nucleotides HSERO_RS00225 and HSERO_RS00230 are separated by 489 nucleotides
HSERO_RS00215: HSERO_RS00215 - hypothetical protein, at 57,620 to 57,916
_RS00215
HSERO_RS00220: HSERO_RS00220 - hypothetical protein, at 58,008 to 58,412
_RS00220
HSERO_RS00225: HSERO_RS00225 - glutamine amidotransferase, at 58,885 to 59,634
_RS00225
HSERO_RS00230: HSERO_RS00230 - hypothetical protein, at 60,124 to 60,444
_RS00230
Position (kb) 58
59
60 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 58.028 kb on - strand at 58.028 kb on - strand at 58.039 kb on + strand at 58.039 kb on + strand at 58.040 kb on - strand at 58.044 kb on + strand at 58.089 kb on + strand at 58.197 kb on + strand, within HSERO_RS00220 at 58.415 kb on - strand at 58.429 kb on + strand at 58.461 kb on - strand at 58.473 kb on + strand at 58.542 kb on + strand at 58.590 kb on - strand at 58.640 kb on - strand at 58.856 kb on - strand at 58.887 kb on + strand at 58.898 kb on + strand at 58.906 kb on - strand at 58.906 kb on - strand at 58.906 kb on - strand at 58.964 kb on + strand, within HSERO_RS00225 at 58.972 kb on - strand, within HSERO_RS00225 at 59.000 kb on + strand, within HSERO_RS00225 at 59.010 kb on + strand, within HSERO_RS00225 at 59.070 kb on - strand, within HSERO_RS00225 at 59.072 kb on - strand, within HSERO_RS00225 at 59.147 kb on + strand, within HSERO_RS00225 at 59.155 kb on - strand, within HSERO_RS00225 at 59.155 kb on - strand, within HSERO_RS00225 at 59.187 kb on - strand, within HSERO_RS00225 at 59.193 kb on + strand, within HSERO_RS00225 at 59.297 kb on + strand, within HSERO_RS00225 at 59.377 kb on + strand, within HSERO_RS00225 at 59.385 kb on - strand, within HSERO_RS00225 at 59.391 kb on - strand, within HSERO_RS00225 at 59.935 kb on + strand at 60.241 kb on + strand, within HSERO_RS00230
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 58,028 - +0.6 58,028 - -1.8 58,039 + -0.9 58,039 + -0.4 58,040 - -1.3 58,044 + -0.7 58,089 + +3.7 58,197 + HSERO_RS00220 0.47 +0.1 58,415 - +0.5 58,429 + +0.0 58,461 - -0.5 58,473 + -0.2 58,542 + -1.3 58,590 - -0.8 58,640 - +0.3 58,856 - -0.0 58,887 + +0.3 58,898 + -0.1 58,906 - -0.1 58,906 - -1.0 58,906 - -0.5 58,964 + HSERO_RS00225 0.11 -0.1 58,972 - HSERO_RS00225 0.12 -0.1 59,000 + HSERO_RS00225 0.15 +0.1 59,010 + HSERO_RS00225 0.17 +1.5 59,070 - HSERO_RS00225 0.25 +0.5 59,072 - HSERO_RS00225 0.25 -0.0 59,147 + HSERO_RS00225 0.35 -0.7 59,155 - HSERO_RS00225 0.36 -0.0 59,155 - HSERO_RS00225 0.36 +0.1 59,187 - HSERO_RS00225 0.40 -2.4 59,193 + HSERO_RS00225 0.41 +0.5 59,297 + HSERO_RS00225 0.55 +0.3 59,377 + HSERO_RS00225 0.66 -1.4 59,385 - HSERO_RS00225 0.67 +0.3 59,391 - HSERO_RS00225 0.67 +0.7 59,935 + -0.3 60,241 + HSERO_RS00230 0.36 +0.8
Or see this region's nucleotide sequence