Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS21490 and CA265_RS21495 overlap by 11 nucleotides CA265_RS21495 and CA265_RS21500 are separated by 121 nucleotides
CA265_RS21490: CA265_RS21490 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 5,292,411 to 5,293,823
_RS21490
CA265_RS21495: CA265_RS21495 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 5,293,813 to 5,294,889
_RS21495
CA265_RS21500: CA265_RS21500 - phosphohydrolase, at 5,295,011 to 5,296,111
_RS21500
Position (kb) 5293
5294
5295 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5293.855 kb on - strand at 5293.963 kb on - strand, within CA265_RS21495 at 5293.990 kb on - strand, within CA265_RS21495 at 5293.990 kb on - strand, within CA265_RS21495 at 5294.035 kb on - strand, within CA265_RS21495 at 5294.111 kb on - strand, within CA265_RS21495 at 5294.239 kb on - strand, within CA265_RS21495 at 5294.296 kb on - strand, within CA265_RS21495 at 5294.739 kb on - strand, within CA265_RS21495 at 5294.962 kb on + strand at 5294.962 kb on + strand at 5294.962 kb on + strand at 5294.995 kb on - strand at 5295.039 kb on + strand at 5295.039 kb on + strand at 5295.098 kb on - strand at 5295.101 kb on + strand at 5295.106 kb on + strand at 5295.107 kb on - strand at 5295.208 kb on + strand, within CA265_RS21500 at 5295.289 kb on + strand, within CA265_RS21500 at 5295.291 kb on + strand, within CA265_RS21500 at 5295.316 kb on + strand, within CA265_RS21500 at 5295.320 kb on + strand, within CA265_RS21500 at 5295.320 kb on + strand, within CA265_RS21500 at 5295.320 kb on + strand, within CA265_RS21500 at 5295.372 kb on + strand, within CA265_RS21500 at 5295.397 kb on + strand, within CA265_RS21500 at 5295.443 kb on - strand, within CA265_RS21500 at 5295.462 kb on + strand, within CA265_RS21500 at 5295.467 kb on + strand, within CA265_RS21500 at 5295.506 kb on + strand, within CA265_RS21500 at 5295.527 kb on + strand, within CA265_RS21500 at 5295.566 kb on - strand, within CA265_RS21500 at 5295.573 kb on + strand, within CA265_RS21500 at 5295.574 kb on - strand, within CA265_RS21500 at 5295.574 kb on - strand, within CA265_RS21500 at 5295.585 kb on + strand, within CA265_RS21500 at 5295.619 kb on + strand, within CA265_RS21500 at 5295.667 kb on + strand, within CA265_RS21500 at 5295.698 kb on + strand, within CA265_RS21500 at 5295.737 kb on + strand, within CA265_RS21500 at 5295.751 kb on + strand, within CA265_RS21500 at 5295.752 kb on - strand, within CA265_RS21500 at 5295.761 kb on + strand, within CA265_RS21500 at 5295.761 kb on + strand, within CA265_RS21500 at 5295.858 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 5,293,855 - -1.0 5,293,963 - CA265_RS21495 0.14 -1.2 5,293,990 - CA265_RS21495 0.16 -2.1 5,293,990 - CA265_RS21495 0.16 +0.2 5,294,035 - CA265_RS21495 0.21 -0.5 5,294,111 - CA265_RS21495 0.28 +0.8 5,294,239 - CA265_RS21495 0.40 -3.1 5,294,296 - CA265_RS21495 0.45 -1.9 5,294,739 - CA265_RS21495 0.86 -1.0 5,294,962 + -1.7 5,294,962 + +0.5 5,294,962 + +0.2 5,294,995 - -0.2 5,295,039 + -0.7 5,295,039 + +0.5 5,295,098 - +0.2 5,295,101 + +0.0 5,295,106 + +0.2 5,295,107 - -0.3 5,295,208 + CA265_RS21500 0.18 -0.3 5,295,289 + CA265_RS21500 0.25 -0.6 5,295,291 + CA265_RS21500 0.25 +0.2 5,295,316 + CA265_RS21500 0.28 +0.4 5,295,320 + CA265_RS21500 0.28 -0.1 5,295,320 + CA265_RS21500 0.28 -0.4 5,295,320 + CA265_RS21500 0.28 +0.7 5,295,372 + CA265_RS21500 0.33 +1.5 5,295,397 + CA265_RS21500 0.35 +0.2 5,295,443 - CA265_RS21500 0.39 +0.5 5,295,462 + CA265_RS21500 0.41 +0.3 5,295,467 + CA265_RS21500 0.41 +0.2 5,295,506 + CA265_RS21500 0.45 -1.4 5,295,527 + CA265_RS21500 0.47 -0.4 5,295,566 - CA265_RS21500 0.50 +0.5 5,295,573 + CA265_RS21500 0.51 -0.0 5,295,574 - CA265_RS21500 0.51 -0.3 5,295,574 - CA265_RS21500 0.51 -1.7 5,295,585 + CA265_RS21500 0.52 +0.1 5,295,619 + CA265_RS21500 0.55 -0.1 5,295,667 + CA265_RS21500 0.60 -0.1 5,295,698 + CA265_RS21500 0.62 +0.2 5,295,737 + CA265_RS21500 0.66 -0.3 5,295,751 + CA265_RS21500 0.67 -0.7 5,295,752 - CA265_RS21500 0.67 +0.2 5,295,761 + CA265_RS21500 0.68 +0.9 5,295,761 + CA265_RS21500 0.68 -1.8 5,295,858 - +0.2
Or see this region's nucleotide sequence