Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03085 and CA265_RS03090 are separated by 614 nucleotides CA265_RS03090 and CA265_RS03095 are separated by 154 nucleotides CA265_RS03095 and CA265_RS03100 are separated by 158 nucleotides
CA265_RS03085: CA265_RS03085 - hypothetical protein, at 763,236 to 763,688
_RS03085
CA265_RS03090: CA265_RS03090 - DNA polymerase III subunit alpha, at 764,303 to 768,736
_RS03090
CA265_RS03095: CA265_RS03095 - thioredoxin, at 768,891 to 769,211
_RS03095
CA265_RS03100: CA265_RS03100 - glucose dehydrogenase, at 769,370 to 770,581
_RS03100
Position (kb) 764
765
766
767
768
769 Strain fitness (log2 ratio) -1
0
1 at 763.341 kb on - strand, within CA265_RS03085 at 763.385 kb on + strand, within CA265_RS03085 at 763.388 kb on + strand, within CA265_RS03085 at 763.389 kb on - strand, within CA265_RS03085 at 763.389 kb on - strand, within CA265_RS03085 at 763.497 kb on - strand, within CA265_RS03085 at 763.535 kb on + strand, within CA265_RS03085 at 763.536 kb on - strand, within CA265_RS03085 at 763.540 kb on - strand, within CA265_RS03085 at 763.550 kb on - strand, within CA265_RS03085 at 763.569 kb on + strand, within CA265_RS03085 at 763.718 kb on + strand at 763.736 kb on - strand at 763.784 kb on + strand at 763.785 kb on - strand at 763.831 kb on + strand at 763.845 kb on - strand at 763.851 kb on - strand at 763.855 kb on + strand at 763.855 kb on + strand at 763.856 kb on - strand at 763.924 kb on - strand at 763.936 kb on + strand at 763.943 kb on + strand at 763.999 kb on - strand at 764.021 kb on - strand at 764.135 kb on - strand at 764.177 kb on - strand at 764.189 kb on - strand at 768.787 kb on + strand at 768.787 kb on + strand at 768.865 kb on + strand at 769.213 kb on + strand at 769.214 kb on - strand at 769.282 kb on + strand at 769.395 kb on + strand at 769.414 kb on + strand at 769.490 kb on + strand at 769.531 kb on - strand, within CA265_RS03100 at 769.553 kb on - strand, within CA265_RS03100 at 769.555 kb on + strand, within CA265_RS03100 at 769.702 kb on - strand, within CA265_RS03100 at 769.702 kb on - strand, within CA265_RS03100 at 769.728 kb on + strand, within CA265_RS03100 at 769.735 kb on - strand, within CA265_RS03100
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 763,341 - CA265_RS03085 0.23 +0.2 763,385 + CA265_RS03085 0.33 -0.0 763,388 + CA265_RS03085 0.34 -0.3 763,389 - CA265_RS03085 0.34 +0.9 763,389 - CA265_RS03085 0.34 +0.3 763,497 - CA265_RS03085 0.58 +0.3 763,535 + CA265_RS03085 0.66 +0.4 763,536 - CA265_RS03085 0.66 -0.3 763,540 - CA265_RS03085 0.67 +1.5 763,550 - CA265_RS03085 0.69 -0.7 763,569 + CA265_RS03085 0.74 -0.5 763,718 + +0.6 763,736 - -0.4 763,784 + +0.7 763,785 - +0.3 763,831 + -0.4 763,845 - -0.5 763,851 - -0.0 763,855 + -0.4 763,855 + -1.1 763,856 - -0.7 763,924 - +0.4 763,936 + -0.5 763,943 + +0.3 763,999 - -0.1 764,021 - -0.3 764,135 - -0.1 764,177 - +0.1 764,189 - -0.4 768,787 + -0.0 768,787 + -0.2 768,865 + -0.4 769,213 + +0.6 769,214 - -0.8 769,282 + -0.5 769,395 + +0.2 769,414 + -0.5 769,490 + -0.1 769,531 - CA265_RS03100 0.13 -0.4 769,553 - CA265_RS03100 0.15 +0.6 769,555 + CA265_RS03100 0.15 +0.9 769,702 - CA265_RS03100 0.27 +0.2 769,702 - CA265_RS03100 0.27 -0.1 769,728 + CA265_RS03100 0.30 +0.7 769,735 - CA265_RS03100 0.30 -0.3
Or see this region's nucleotide sequence