Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS36140 and BPHYT_RS36145 are separated by 398 nucleotides BPHYT_RS36145 and BPHYT_RS36150 are separated by 514 nucleotides BPHYT_RS36150 and BPHYT_RS36155 are separated by 5 nucleotides
BPHYT_RS36140: BPHYT_RS36140 - hypothetical protein, at 45,804 to 46,325
_RS36140
BPHYT_RS36145: BPHYT_RS36145 - hypothetical protein, at 46,724 to 46,978
_RS36145
BPHYT_RS36150: BPHYT_RS36150 - hypothetical protein, at 47,493 to 47,726
_RS36150
BPHYT_RS36155: BPHYT_RS36155 - hypothetical protein, at 47,732 to 47,947
_RS36155
Position (kb) 46
47 Strain fitness (log2 ratio) -1
0
1 at 45.778 kb on - strand at 45.909 kb on - strand, within BPHYT_RS36140 at 46.222 kb on + strand, within BPHYT_RS36140 at 46.443 kb on + strand at 46.444 kb on - strand at 46.448 kb on - strand at 46.448 kb on - strand at 46.793 kb on + strand, within BPHYT_RS36145 at 47.023 kb on + strand at 47.024 kb on - strand at 47.179 kb on + strand at 47.179 kb on + strand at 47.180 kb on - strand at 47.533 kb on + strand, within BPHYT_RS36150 at 47.660 kb on + strand, within BPHYT_RS36150 at 47.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 45,778 - -1.6 45,909 - BPHYT_RS36140 0.20 +1.1 46,222 + BPHYT_RS36140 0.80 +0.0 46,443 + +0.3 46,444 - -0.0 46,448 - +0.5 46,448 - -0.2 46,793 + BPHYT_RS36145 0.27 -1.0 47,023 + -0.8 47,024 - -0.6 47,179 + -0.2 47,179 + -0.4 47,180 - +0.1 47,533 + BPHYT_RS36150 0.17 -0.1 47,660 + BPHYT_RS36150 0.71 +0.2 47,950 - +0.0
Or see this region's nucleotide sequence