Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS27500 and BPHYT_RS27505 are separated by 7 nucleotides BPHYT_RS27505 and BPHYT_RS27510 are separated by 509 nucleotides BPHYT_RS27510 and BPHYT_RS27515 are separated by 83 nucleotides
BPHYT_RS27500: BPHYT_RS27500 - hypothetical protein, at 1,746,239 to 1,746,736
_RS27500
BPHYT_RS27505: BPHYT_RS27505 - hypothetical protein, at 1,746,744 to 1,747,418
_RS27505
BPHYT_RS27510: BPHYT_RS27510 - hypothetical protein, at 1,747,928 to 1,748,290
_RS27510
BPHYT_RS27515: BPHYT_RS27515 - hypothetical protein, at 1,748,374 to 1,748,565
_RS27515
Position (kb) 1746
1747
1748 Strain fitness (log2 ratio) -1
0
1 at 1745.867 kb on - strand at 1746.071 kb on + strand at 1746.257 kb on + strand at 1746.480 kb on + strand, within BPHYT_RS27500 at 1746.481 kb on - strand, within BPHYT_RS27500 at 1746.634 kb on + strand, within BPHYT_RS27500 at 1746.645 kb on - strand, within BPHYT_RS27500 at 1746.960 kb on - strand, within BPHYT_RS27505 at 1747.094 kb on - strand, within BPHYT_RS27505 at 1747.195 kb on - strand, within BPHYT_RS27505 at 1747.864 kb on + strand at 1747.865 kb on - strand at 1747.964 kb on - strand at 1748.194 kb on + strand, within BPHYT_RS27510
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 1,745,867 - +0.0 1,746,071 + -0.2 1,746,257 + +0.4 1,746,480 + BPHYT_RS27500 0.48 -0.0 1,746,481 - BPHYT_RS27500 0.49 +0.2 1,746,634 + BPHYT_RS27500 0.79 +0.3 1,746,645 - BPHYT_RS27500 0.82 +0.6 1,746,960 - BPHYT_RS27505 0.32 +0.8 1,747,094 - BPHYT_RS27505 0.52 +0.4 1,747,195 - BPHYT_RS27505 0.67 +0.6 1,747,864 + +0.3 1,747,865 - -0.1 1,747,964 - +0.2 1,748,194 + BPHYT_RS27510 0.73 -0.3
Or see this region's nucleotide sequence