Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS04865 and BPHYT_RS04870 are separated by 42 nucleotides BPHYT_RS04870 and BPHYT_RS04875 overlap by 16 nucleotides BPHYT_RS04875 and BPHYT_RS04880 are separated by 29 nucleotides
BPHYT_RS04865: BPHYT_RS04865 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 1,120,455 to 1,121,516
_RS04865
BPHYT_RS04870: BPHYT_RS04870 - cobalamin synthase, at 1,121,559 to 1,122,335
_RS04870
BPHYT_RS04875: BPHYT_RS04875 - alpha-ribazole phosphatase, at 1,122,320 to 1,122,910
_RS04875
BPHYT_RS04880: BPHYT_RS04880 - cobalamin-binding protein, at 1,122,940 to 1,123,842
_RS04880
Position (kb)
1121
1122
1123 Strain fitness (log2 ratio)
-1
0
1 at 1121.208 kb on + strand, within BPHYT_RS04865 at 1121.209 kb on - strand, within BPHYT_RS04865 at 1121.310 kb on + strand, within BPHYT_RS04865 at 1121.311 kb on - strand, within BPHYT_RS04865 at 1121.652 kb on + strand, within BPHYT_RS04870 at 1121.692 kb on + strand, within BPHYT_RS04870 at 1121.721 kb on + strand, within BPHYT_RS04870 at 1121.722 kb on - strand, within BPHYT_RS04870 at 1121.850 kb on + strand, within BPHYT_RS04870 at 1121.850 kb on + strand, within BPHYT_RS04870 at 1122.027 kb on + strand, within BPHYT_RS04870 at 1122.028 kb on - strand, within BPHYT_RS04870 at 1122.035 kb on + strand, within BPHYT_RS04870 at 1122.206 kb on - strand, within BPHYT_RS04870 at 1122.229 kb on - strand, within BPHYT_RS04870 at 1122.252 kb on + strand, within BPHYT_RS04870 at 1122.624 kb on + strand, within BPHYT_RS04875 at 1122.749 kb on + strand, within BPHYT_RS04875 at 1122.750 kb on - strand, within BPHYT_RS04875 at 1122.922 kb on + strand at 1122.922 kb on + strand at 1122.922 kb on + strand at 1122.923 kb on - strand at 1122.923 kb on - strand at 1122.928 kb on - strand at 1122.928 kb on - strand at 1123.316 kb on + strand, within BPHYT_RS04880
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 1,121,208 + BPHYT_RS04865 0.71 -1.3 1,121,209 - BPHYT_RS04865 0.71 -0.0 1,121,310 + BPHYT_RS04865 0.81 -1.7 1,121,311 - BPHYT_RS04865 0.81 -1.3 1,121,652 + BPHYT_RS04870 0.12 -0.1 1,121,692 + BPHYT_RS04870 0.17 -0.6 1,121,721 + BPHYT_RS04870 0.21 -0.5 1,121,722 - BPHYT_RS04870 0.21 -0.1 1,121,850 + BPHYT_RS04870 0.37 -0.5 1,121,850 + BPHYT_RS04870 0.37 -0.1 1,122,027 + BPHYT_RS04870 0.60 -0.6 1,122,028 - BPHYT_RS04870 0.60 -0.2 1,122,035 + BPHYT_RS04870 0.61 -1.0 1,122,206 - BPHYT_RS04870 0.83 -0.2 1,122,229 - BPHYT_RS04870 0.86 -0.3 1,122,252 + BPHYT_RS04870 0.89 -0.8 1,122,624 + BPHYT_RS04875 0.51 -1.6 1,122,749 + BPHYT_RS04875 0.73 -0.4 1,122,750 - BPHYT_RS04875 0.73 -0.7 1,122,922 + -0.3 1,122,922 + +0.6 1,122,922 + -0.3 1,122,923 - -0.1 1,122,923 - -1.1 1,122,928 - +0.2 1,122,928 - +0.1 1,123,316 + BPHYT_RS04880 0.42 +0.4
Or see this region's nucleotide sequence