Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03500 and BPHYT_RS03505 are separated by 8 nucleotides BPHYT_RS03505 and BPHYT_RS03510 are separated by 149 nucleotides
BPHYT_RS03500: BPHYT_RS03500 - glycolate oxidase, at 788,936 to 790,162
_RS03500
BPHYT_RS03505: BPHYT_RS03505 - FAD-binding protein, at 790,171 to 791,259
_RS03505
BPHYT_RS03510: BPHYT_RS03510 - FAD-binding protein, at 791,409 to 792,902
_RS03510
Position (kb) 790
791
792 Strain fitness (log2 ratio) -2
-1
0
1 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.394 kb on - strand, within BPHYT_RS03500 at 789.459 kb on + strand, within BPHYT_RS03500 at 789.513 kb on + strand, within BPHYT_RS03500 at 789.591 kb on - strand, within BPHYT_RS03500 at 789.891 kb on + strand, within BPHYT_RS03500 at 790.006 kb on - strand, within BPHYT_RS03500 at 790.050 kb on + strand at 790.975 kb on - strand, within BPHYT_RS03505 at 790.975 kb on - strand, within BPHYT_RS03505 at 791.096 kb on + strand, within BPHYT_RS03505 at 791.096 kb on + strand, within BPHYT_RS03505 at 791.097 kb on - strand, within BPHYT_RS03505 at 791.292 kb on + strand at 791.403 kb on - strand at 791.779 kb on + strand, within BPHYT_RS03510 at 791.780 kb on - strand, within BPHYT_RS03510 at 791.780 kb on - strand, within BPHYT_RS03510 at 791.822 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.857 kb on + strand, within BPHYT_RS03510 at 791.858 kb on - strand, within BPHYT_RS03510 at 791.871 kb on - strand, within BPHYT_RS03510 at 792.033 kb on + strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 789,256 + BPHYT_RS03500 0.26 +0.6 789,256 + BPHYT_RS03500 0.26 +0.3 789,256 + BPHYT_RS03500 0.26 -0.1 789,394 - BPHYT_RS03500 0.37 -0.1 789,459 + BPHYT_RS03500 0.43 +0.7 789,513 + BPHYT_RS03500 0.47 +1.1 789,591 - BPHYT_RS03500 0.53 -0.1 789,891 + BPHYT_RS03500 0.78 -0.9 790,006 - BPHYT_RS03500 0.87 +0.1 790,050 + -0.3 790,975 - BPHYT_RS03505 0.74 -0.5 790,975 - BPHYT_RS03505 0.74 +0.3 791,096 + BPHYT_RS03505 0.85 +0.0 791,096 + BPHYT_RS03505 0.85 +0.4 791,097 - BPHYT_RS03505 0.85 +1.0 791,292 + -1.2 791,403 - +0.2 791,779 + BPHYT_RS03510 0.25 -0.6 791,780 - BPHYT_RS03510 0.25 -0.0 791,780 - BPHYT_RS03510 0.25 +0.1 791,822 + BPHYT_RS03510 0.28 +0.0 791,854 + BPHYT_RS03510 0.30 -1.2 791,854 + BPHYT_RS03510 0.30 +0.3 791,854 + BPHYT_RS03510 0.30 -0.5 791,857 + BPHYT_RS03510 0.30 +0.4 791,858 - BPHYT_RS03510 0.30 +0.1 791,871 - BPHYT_RS03510 0.31 +0.5 792,033 + BPHYT_RS03510 0.42 -2.5 792,034 - BPHYT_RS03510 0.42 +0.5 792,034 - BPHYT_RS03510 0.42 -0.0 792,034 - BPHYT_RS03510 0.42 -1.5
Or see this region's nucleotide sequence