Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01405 and BPHYT_RS01410 are separated by 426 nucleotides BPHYT_RS01410 and BPHYT_RS01415 are separated by 204 nucleotides BPHYT_RS01415 and BPHYT_RS01420 are separated by 35 nucleotides
BPHYT_RS01405: BPHYT_RS01405 - cell division protein Fic, at 320,259 to 321,335
_RS01405
BPHYT_RS01410: BPHYT_RS01410 - tRNA-Lys, at 321,762 to 321,837
_RS01410
BPHYT_RS01415: BPHYT_RS01415 - phenylacetic acid degradation protein, at 322,042 to 322,446
_RS01415
BPHYT_RS01420: BPHYT_RS01420 - patatin, at 322,482 to 323,360
_RS01420
Position (kb) 322
323 Strain fitness (log2 ratio) -2
-1
0
1 at 321.063 kb on + strand, within BPHYT_RS01405 at 321.063 kb on + strand, within BPHYT_RS01405 at 321.064 kb on - strand, within BPHYT_RS01405 at 321.064 kb on - strand, within BPHYT_RS01405 at 321.064 kb on - strand, within BPHYT_RS01405 at 321.064 kb on - strand, within BPHYT_RS01405 at 321.088 kb on + strand, within BPHYT_RS01405 at 321.088 kb on + strand, within BPHYT_RS01405 at 321.088 kb on + strand, within BPHYT_RS01405 at 321.089 kb on - strand, within BPHYT_RS01405 at 321.089 kb on - strand, within BPHYT_RS01405 at 321.089 kb on - strand, within BPHYT_RS01405 at 321.089 kb on - strand, within BPHYT_RS01405 at 321.089 kb on - strand, within BPHYT_RS01405 at 321.106 kb on + strand, within BPHYT_RS01405 at 321.107 kb on - strand, within BPHYT_RS01405 at 321.107 kb on - strand, within BPHYT_RS01405 at 321.194 kb on + strand, within BPHYT_RS01405 at 321.194 kb on + strand, within BPHYT_RS01405 at 321.195 kb on - strand, within BPHYT_RS01405 at 321.195 kb on - strand, within BPHYT_RS01405 at 321.227 kb on + strand, within BPHYT_RS01405 at 321.228 kb on - strand at 321.228 kb on - strand at 321.231 kb on + strand at 321.231 kb on + strand at 321.231 kb on + strand at 321.231 kb on + strand at 321.231 kb on + strand at 321.232 kb on - strand at 321.232 kb on - strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.235 kb on + strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.236 kb on - strand at 321.241 kb on + strand at 321.242 kb on - strand at 321.242 kb on - strand at 321.315 kb on + strand at 321.315 kb on + strand at 321.315 kb on + strand at 321.316 kb on - strand at 321.316 kb on - strand at 321.316 kb on - strand at 321.316 kb on - strand at 321.316 kb on - strand at 321.316 kb on - strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.384 kb on + strand at 321.385 kb on - strand at 321.385 kb on - strand at 321.385 kb on - strand at 321.385 kb on - strand at 321.385 kb on - strand at 321.385 kb on - strand at 321.404 kb on + strand at 321.404 kb on + strand at 321.405 kb on - strand at 321.405 kb on - strand at 321.405 kb on - strand at 321.484 kb on + strand at 321.485 kb on - strand at 321.504 kb on + strand at 321.504 kb on + strand at 321.505 kb on - strand at 321.508 kb on + strand at 321.525 kb on + strand at 321.525 kb on + strand at 321.525 kb on + strand at 321.525 kb on + strand at 321.526 kb on - strand at 321.526 kb on - strand at 321.526 kb on - strand at 321.535 kb on + strand at 321.539 kb on + strand at 321.568 kb on - strand at 321.568 kb on - strand at 321.586 kb on + strand at 321.587 kb on - strand at 321.674 kb on - strand at 321.887 kb on + strand at 322.060 kb on - strand at 322.125 kb on - strand, within BPHYT_RS01415 at 322.385 kb on + strand, within BPHYT_RS01415 at 322.385 kb on + strand, within BPHYT_RS01415 at 322.429 kb on + strand at 322.429 kb on + strand at 322.430 kb on - strand at 322.430 kb on - strand at 322.430 kb on - strand at 322.466 kb on + strand at 322.466 kb on + strand at 322.499 kb on - strand at 322.499 kb on - strand at 322.593 kb on - strand, within BPHYT_RS01420 at 322.626 kb on + strand, within BPHYT_RS01420 at 322.626 kb on + strand, within BPHYT_RS01420 at 322.627 kb on - strand, within BPHYT_RS01420 at 322.627 kb on - strand, within BPHYT_RS01420 at 322.656 kb on + strand, within BPHYT_RS01420 at 322.656 kb on + strand, within BPHYT_RS01420 at 322.659 kb on + strand, within BPHYT_RS01420 at 322.659 kb on + strand, within BPHYT_RS01420 at 322.659 kb on + strand, within BPHYT_RS01420 at 322.659 kb on + strand, within BPHYT_RS01420 at 322.659 kb on + strand, within BPHYT_RS01420 at 322.660 kb on - strand, within BPHYT_RS01420 at 322.737 kb on + strand, within BPHYT_RS01420 at 322.746 kb on + strand, within BPHYT_RS01420 at 322.771 kb on - strand, within BPHYT_RS01420 at 322.882 kb on - strand, within BPHYT_RS01420 at 322.882 kb on - strand, within BPHYT_RS01420 at 322.896 kb on + strand, within BPHYT_RS01420 at 322.896 kb on + strand, within BPHYT_RS01420 at 323.152 kb on - strand, within BPHYT_RS01420 at 323.202 kb on + strand, within BPHYT_RS01420 at 323.202 kb on + strand, within BPHYT_RS01420 at 323.202 kb on + strand, within BPHYT_RS01420 at 323.274 kb on + strand at 323.274 kb on + strand at 323.274 kb on + strand at 323.275 kb on - strand at 323.443 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 321,063 + BPHYT_RS01405 0.75 -0.6 321,063 + BPHYT_RS01405 0.75 +0.2 321,064 - BPHYT_RS01405 0.75 +0.5 321,064 - BPHYT_RS01405 0.75 -0.8 321,064 - BPHYT_RS01405 0.75 -0.1 321,064 - BPHYT_RS01405 0.75 -0.1 321,088 + BPHYT_RS01405 0.77 +0.7 321,088 + BPHYT_RS01405 0.77 +0.0 321,088 + BPHYT_RS01405 0.77 -0.2 321,089 - BPHYT_RS01405 0.77 -0.5 321,089 - BPHYT_RS01405 0.77 +0.5 321,089 - BPHYT_RS01405 0.77 -0.4 321,089 - BPHYT_RS01405 0.77 -0.2 321,089 - BPHYT_RS01405 0.77 +0.1 321,106 + BPHYT_RS01405 0.79 -1.1 321,107 - BPHYT_RS01405 0.79 -0.1 321,107 - BPHYT_RS01405 0.79 -0.3 321,194 + BPHYT_RS01405 0.87 -0.6 321,194 + BPHYT_RS01405 0.87 +0.1 321,195 - BPHYT_RS01405 0.87 -0.2 321,195 - BPHYT_RS01405 0.87 -0.4 321,227 + BPHYT_RS01405 0.90 -0.3 321,228 - +0.3 321,228 - +0.3 321,231 + -0.8 321,231 + -0.1 321,231 + +0.5 321,231 + +0.6 321,231 + -0.8 321,232 - +0.3 321,232 - -0.2 321,235 + -0.6 321,235 + -0.1 321,235 + -0.0 321,235 + -0.3 321,235 + +0.0 321,235 + -0.4 321,235 + -0.0 321,235 + -0.0 321,236 - -0.2 321,236 - +0.5 321,236 - +0.1 321,236 - +0.5 321,236 - -0.9 321,236 - +0.2 321,236 - -0.4 321,236 - -1.0 321,241 + -0.7 321,242 - +0.0 321,242 - -0.4 321,315 + -1.2 321,315 + -0.3 321,315 + -0.4 321,316 - +0.3 321,316 - +0.0 321,316 - -0.6 321,316 - -0.0 321,316 - -0.4 321,316 - +0.4 321,384 + -0.4 321,384 + -0.5 321,384 + -0.2 321,384 + +0.3 321,384 + -0.7 321,384 + -0.8 321,384 + -0.7 321,385 - +0.4 321,385 - -0.6 321,385 - +0.6 321,385 - +0.6 321,385 - -0.0 321,385 - +0.9 321,404 + -0.5 321,404 + -0.9 321,405 - +0.8 321,405 - -0.8 321,405 - +0.9 321,484 + -0.6 321,485 - -1.6 321,504 + -1.2 321,504 + -2.4 321,505 - -0.3 321,508 + -1.1 321,525 + -0.6 321,525 + +0.3 321,525 + -0.6 321,525 + +1.5 321,526 - +0.6 321,526 - +0.5 321,526 - -1.0 321,535 + +0.2 321,539 + -0.7 321,568 - -1.1 321,568 - +0.1 321,586 + -0.6 321,587 - -0.2 321,674 - +0.2 321,887 + -0.4 322,060 - -0.9 322,125 - BPHYT_RS01415 0.20 +0.4 322,385 + BPHYT_RS01415 0.85 +0.4 322,385 + BPHYT_RS01415 0.85 +1.4 322,429 + -0.2 322,429 + +0.2 322,430 - +1.1 322,430 - +1.5 322,430 - -1.1 322,466 + +0.1 322,466 + -1.6 322,499 - -0.7 322,499 - -1.4 322,593 - BPHYT_RS01420 0.13 -0.0 322,626 + BPHYT_RS01420 0.16 +0.1 322,626 + BPHYT_RS01420 0.16 -0.6 322,627 - BPHYT_RS01420 0.16 +0.6 322,627 - BPHYT_RS01420 0.16 -0.1 322,656 + BPHYT_RS01420 0.20 +0.1 322,656 + BPHYT_RS01420 0.20 +0.6 322,659 + BPHYT_RS01420 0.20 -0.1 322,659 + BPHYT_RS01420 0.20 +0.4 322,659 + BPHYT_RS01420 0.20 +0.1 322,659 + BPHYT_RS01420 0.20 +0.3 322,659 + BPHYT_RS01420 0.20 -0.4 322,660 - BPHYT_RS01420 0.20 +1.4 322,737 + BPHYT_RS01420 0.29 +0.4 322,746 + BPHYT_RS01420 0.30 -0.2 322,771 - BPHYT_RS01420 0.33 +0.1 322,882 - BPHYT_RS01420 0.46 -0.2 322,882 - BPHYT_RS01420 0.46 +0.6 322,896 + BPHYT_RS01420 0.47 +0.1 322,896 + BPHYT_RS01420 0.47 -0.6 323,152 - BPHYT_RS01420 0.76 -0.2 323,202 + BPHYT_RS01420 0.82 +0.4 323,202 + BPHYT_RS01420 0.82 -0.2 323,202 + BPHYT_RS01420 0.82 +0.2 323,274 + +0.0 323,274 + -0.1 323,274 + -0.2 323,275 - -0.0 323,443 - +0.2
Or see this region's nucleotide sequence