Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29585 and AO356_29590 are separated by 244 nucleotides AO356_29590 and AO356_29595 are separated by 146 nucleotides
AO356_29585: AO356_29585 - alpha/beta hydrolase, at 6,882,467 to 6,883,237
_29585
AO356_29590: AO356_29590 - ester cyclase, at 6,883,482 to 6,883,874
_29590
AO356_29595: AO356_29595 - trehalose synthase, at 6,884,021 to 6,886,087
_29595
Position (kb)
6883
6884 Strain fitness (log2 ratio)
-1
0
1
2 at 6882.738 kb on - strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.797 kb on + strand, within AO356_29585 at 6882.923 kb on + strand, within AO356_29585 at 6882.923 kb on + strand, within AO356_29585 at 6882.923 kb on + strand, within AO356_29585 at 6882.924 kb on - strand, within AO356_29585 at 6882.924 kb on - strand, within AO356_29585 at 6882.937 kb on + strand, within AO356_29585 at 6883.077 kb on + strand, within AO356_29585 at 6883.077 kb on + strand, within AO356_29585 at 6883.077 kb on + strand, within AO356_29585 at 6883.094 kb on - strand, within AO356_29585 at 6883.236 kb on - strand at 6883.429 kb on + strand at 6883.436 kb on + strand at 6883.506 kb on + strand at 6883.506 kb on + strand at 6883.507 kb on - strand at 6883.508 kb on + strand at 6883.515 kb on + strand at 6883.516 kb on - strand at 6883.791 kb on + strand, within AO356_29590 at 6883.791 kb on + strand, within AO356_29590 at 6883.838 kb on + strand at 6883.843 kb on + strand at 6883.938 kb on + strand at 6883.939 kb on - strand at 6883.971 kb on + strand at 6883.972 kb on - strand at 6883.972 kb on - strand at 6884.039 kb on - strand at 6884.039 kb on - strand at 6884.039 kb on - strand at 6884.104 kb on + strand at 6884.313 kb on + strand, within AO356_29595 at 6884.314 kb on - strand, within AO356_29595 at 6884.463 kb on + strand, within AO356_29595 at 6884.592 kb on + strand, within AO356_29595 at 6884.593 kb on - strand, within AO356_29595 at 6884.593 kb on - strand, within AO356_29595 at 6884.593 kb on - strand, within AO356_29595 at 6884.633 kb on - strand, within AO356_29595 at 6884.644 kb on + strand, within AO356_29595 at 6884.733 kb on + strand, within AO356_29595 at 6884.734 kb on - strand, within AO356_29595 at 6884.763 kb on + strand, within AO356_29595 at 6884.763 kb on + strand, within AO356_29595 at 6884.763 kb on + strand, within AO356_29595 at 6884.764 kb on - strand, within AO356_29595 at 6884.764 kb on - strand, within AO356_29595 at 6884.764 kb on - strand, within AO356_29595 at 6884.821 kb on - strand, within AO356_29595 at 6884.821 kb on - strand, within AO356_29595 at 6884.826 kb on + strand, within AO356_29595 at 6884.827 kb on - strand, within AO356_29595 at 6884.827 kb on - strand, within AO356_29595 at 6884.827 kb on - strand, within AO356_29595 at 6884.827 kb on - strand, within AO356_29595 at 6884.827 kb on - strand, within AO356_29595 at 6884.830 kb on + strand, within AO356_29595 at 6884.830 kb on + strand, within AO356_29595 at 6884.830 kb on + strand, within AO356_29595 at 6884.830 kb on + strand, within AO356_29595 at 6884.831 kb on - strand, within AO356_29595 at 6884.831 kb on - strand, within AO356_29595
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 6,882,738 - AO356_29585 0.35 +1.8 6,882,797 + AO356_29585 0.43 -0.2 6,882,797 + AO356_29585 0.43 +0.1 6,882,797 + AO356_29585 0.43 +0.8 6,882,797 + AO356_29585 0.43 -0.0 6,882,797 + AO356_29585 0.43 -0.4 6,882,797 + AO356_29585 0.43 +1.2 6,882,923 + AO356_29585 0.59 +0.1 6,882,923 + AO356_29585 0.59 -0.3 6,882,923 + AO356_29585 0.59 +0.2 6,882,924 - AO356_29585 0.59 -1.1 6,882,924 - AO356_29585 0.59 -0.4 6,882,937 + AO356_29585 0.61 +1.0 6,883,077 + AO356_29585 0.79 -0.3 6,883,077 + AO356_29585 0.79 -1.4 6,883,077 + AO356_29585 0.79 -0.5 6,883,094 - AO356_29585 0.81 -0.2 6,883,236 - -0.1 6,883,429 + +0.4 6,883,436 + -1.3 6,883,506 + -0.5 6,883,506 + +0.3 6,883,507 - -0.0 6,883,508 + +1.4 6,883,515 + +0.0 6,883,516 - +0.3 6,883,791 + AO356_29590 0.79 +1.3 6,883,791 + AO356_29590 0.79 +0.4 6,883,838 + -0.4 6,883,843 + -0.0 6,883,938 + +1.0 6,883,939 - +0.5 6,883,971 + -0.3 6,883,972 - +0.5 6,883,972 - -0.0 6,884,039 - -0.3 6,884,039 - -0.8 6,884,039 - +0.7 6,884,104 + -1.2 6,884,313 + AO356_29595 0.14 +0.2 6,884,314 - AO356_29595 0.14 -0.5 6,884,463 + AO356_29595 0.21 +0.7 6,884,592 + AO356_29595 0.28 -0.8 6,884,593 - AO356_29595 0.28 +0.1 6,884,593 - AO356_29595 0.28 -0.5 6,884,593 - AO356_29595 0.28 -0.2 6,884,633 - AO356_29595 0.30 -0.2 6,884,644 + AO356_29595 0.30 +0.4 6,884,733 + AO356_29595 0.34 +0.5 6,884,734 - AO356_29595 0.34 +0.2 6,884,763 + AO356_29595 0.36 -0.2 6,884,763 + AO356_29595 0.36 +0.4 6,884,763 + AO356_29595 0.36 +0.3 6,884,764 - AO356_29595 0.36 +0.8 6,884,764 - AO356_29595 0.36 +0.1 6,884,764 - AO356_29595 0.36 -0.8 6,884,821 - AO356_29595 0.39 -0.2 6,884,821 - AO356_29595 0.39 +1.1 6,884,826 + AO356_29595 0.39 -0.7 6,884,827 - AO356_29595 0.39 +0.3 6,884,827 - AO356_29595 0.39 -0.1 6,884,827 - AO356_29595 0.39 -0.8 6,884,827 - AO356_29595 0.39 -0.3 6,884,827 - AO356_29595 0.39 +0.3 6,884,830 + AO356_29595 0.39 +0.5 6,884,830 + AO356_29595 0.39 +0.5 6,884,830 + AO356_29595 0.39 -0.9 6,884,830 + AO356_29595 0.39 -0.6 6,884,831 - AO356_29595 0.39 -0.0 6,884,831 - AO356_29595 0.39 +0.0
Or see this region's nucleotide sequence