Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04840 and AO356_04845 are separated by 120 nucleotides AO356_04845 and AO356_04850 are separated by 159 nucleotides AO356_04850 and AO356_04855 are separated by 17 nucleotides
AO356_04840: AO356_04840 - glycerol acyltransferase, at 1,088,706 to 1,089,497
_04840
AO356_04845: AO356_04845 - ACP phosphodiesterase, at 1,089,618 to 1,090,202
_04845
AO356_04850: AO356_04850 - ArsR family transcriptional regulator, at 1,090,362 to 1,090,664
_04850
AO356_04855: AO356_04855 - arabinose transporter permease, at 1,090,682 to 1,091,848
_04855
Position (kb)
1090
1091 Strain fitness (log2 ratio)
-1
0
1 at 1089.558 kb on + strand at 1089.558 kb on + strand at 1089.558 kb on + strand at 1089.584 kb on + strand at 1089.584 kb on + strand at 1089.585 kb on - strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.668 kb on - strand at 1089.700 kb on + strand, within AO356_04845 at 1089.701 kb on - strand, within AO356_04845 at 1089.701 kb on - strand, within AO356_04845 at 1089.774 kb on + strand, within AO356_04845 at 1089.802 kb on + strand, within AO356_04845 at 1089.803 kb on - strand, within AO356_04845 at 1089.830 kb on + strand, within AO356_04845 at 1089.830 kb on + strand, within AO356_04845 at 1089.832 kb on + strand, within AO356_04845 at 1089.833 kb on - strand, within AO356_04845 at 1089.882 kb on + strand, within AO356_04845 at 1089.883 kb on - strand, within AO356_04845 at 1089.883 kb on - strand, within AO356_04845 at 1089.928 kb on + strand, within AO356_04845 at 1089.928 kb on + strand, within AO356_04845 at 1089.929 kb on - strand, within AO356_04845 at 1089.989 kb on - strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.102 kb on + strand, within AO356_04845 at 1090.103 kb on - strand, within AO356_04845 at 1090.103 kb on - strand, within AO356_04845 at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.196 kb on - strand at 1090.196 kb on - strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.237 kb on + strand at 1090.238 kb on - strand at 1090.239 kb on + strand at 1090.249 kb on + strand at 1090.299 kb on + strand at 1090.320 kb on - strand at 1090.384 kb on + strand at 1090.387 kb on + strand at 1090.952 kb on + strand, within AO356_04855 at 1090.952 kb on + strand, within AO356_04855 at 1090.952 kb on + strand, within AO356_04855 at 1090.953 kb on - strand, within AO356_04855 at 1091.262 kb on + strand, within AO356_04855 at 1091.262 kb on + strand, within AO356_04855 at 1091.342 kb on + strand, within AO356_04855 at 1091.342 kb on + strand, within AO356_04855 at 1091.342 kb on + strand, within AO356_04855 at 1091.342 kb on + strand, within AO356_04855 at 1091.343 kb on - strand, within AO356_04855 at 1091.343 kb on - strand, within AO356_04855 at 1091.343 kb on - strand, within AO356_04855 at 1091.343 kb on - strand, within AO356_04855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,089,558 + -0.2 1,089,558 + -0.2 1,089,558 + +0.7 1,089,584 + -0.5 1,089,584 + -0.9 1,089,585 - -1.3 1,089,619 + -0.2 1,089,619 + +0.0 1,089,619 + +0.2 1,089,619 + +0.2 1,089,619 + +1.3 1,089,668 - -0.6 1,089,700 + AO356_04845 0.14 -0.2 1,089,701 - AO356_04845 0.14 -0.0 1,089,701 - AO356_04845 0.14 +0.9 1,089,774 + AO356_04845 0.27 -0.6 1,089,802 + AO356_04845 0.31 +0.7 1,089,803 - AO356_04845 0.32 +0.2 1,089,830 + AO356_04845 0.36 -1.1 1,089,830 + AO356_04845 0.36 -1.2 1,089,832 + AO356_04845 0.37 +0.4 1,089,833 - AO356_04845 0.37 -0.4 1,089,882 + AO356_04845 0.45 +0.5 1,089,883 - AO356_04845 0.45 -0.5 1,089,883 - AO356_04845 0.45 -1.4 1,089,928 + AO356_04845 0.53 +0.9 1,089,928 + AO356_04845 0.53 +0.5 1,089,929 - AO356_04845 0.53 -0.1 1,089,989 - AO356_04845 0.63 +0.5 1,090,051 + AO356_04845 0.74 +0.7 1,090,051 + AO356_04845 0.74 +0.4 1,090,051 + AO356_04845 0.74 +0.1 1,090,051 + AO356_04845 0.74 +0.6 1,090,052 - AO356_04845 0.74 +0.1 1,090,052 - AO356_04845 0.74 -0.9 1,090,052 - AO356_04845 0.74 -0.1 1,090,052 - AO356_04845 0.74 -0.9 1,090,052 - AO356_04845 0.74 +0.4 1,090,102 + AO356_04845 0.83 +0.6 1,090,103 - AO356_04845 0.83 -0.1 1,090,103 - AO356_04845 0.83 +1.6 1,090,195 + +0.5 1,090,195 + +0.0 1,090,195 + +0.2 1,090,195 + +0.0 1,090,196 - -0.6 1,090,196 - -0.3 1,090,214 + +0.5 1,090,214 + -0.1 1,090,214 + +1.2 1,090,214 + +0.3 1,090,215 - +0.0 1,090,215 - +0.2 1,090,215 - +1.0 1,090,215 - -0.6 1,090,237 + -0.4 1,090,238 - +0.9 1,090,239 + -0.5 1,090,249 + -0.4 1,090,299 + -1.5 1,090,320 - +0.6 1,090,384 + -0.3 1,090,387 + +0.8 1,090,952 + AO356_04855 0.23 +0.1 1,090,952 + AO356_04855 0.23 +0.7 1,090,952 + AO356_04855 0.23 +0.2 1,090,953 - AO356_04855 0.23 +0.1 1,091,262 + AO356_04855 0.50 +1.0 1,091,262 + AO356_04855 0.50 +0.2 1,091,342 + AO356_04855 0.57 +1.1 1,091,342 + AO356_04855 0.57 +0.5 1,091,342 + AO356_04855 0.57 -0.3 1,091,342 + AO356_04855 0.57 +0.6 1,091,343 - AO356_04855 0.57 +0.9 1,091,343 - AO356_04855 0.57 -0.4 1,091,343 - AO356_04855 0.57 +0.9 1,091,343 - AO356_04855 0.57 +1.4
Or see this region's nucleotide sequence