Strain Fitness in Pantoea sp. MT58 around IAI47_17980

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
3,817,421	+		IAI47_17970	0.53	+2.5
3,817,421	+		IAI47_17970	0.53	+1.5
3,817,421	+		IAI47_17970	0.53	+1.6
3,817,421	+		IAI47_17970	0.53	+1.1
3,817,421	+		IAI47_17970	0.53	-0.5
3,817,422	-		IAI47_17970	0.53	-0.9
3,817,422	-		IAI47_17970	0.53	-1.0
3,817,422	-		IAI47_17970	0.53	+0.6
3,817,422	-		IAI47_17970	0.53	-0.4
3,817,500	-		IAI47_17970	0.84	+0.9
3,817,505	+		IAI47_17970	0.86	-0.9
3,817,506	-		IAI47_17970	0.86	-2.0
3,817,566	-				+0.7
3,817,576	-				+2.2
3,817,604	+				-3.9
3,817,604	+				+2.8
3,817,604	+				+1.4
3,817,605	-				-1.8
3,817,674	+				+1.8
3,817,674	+				+1.1
3,817,675	-				+1.1
3,817,675	-				+0.1
3,817,675	-				-0.6
3,817,680	+				+0.6
3,817,680	+				-0.7
3,817,680	+				+1.8
3,817,681	-				-0.9
3,817,681	-				+1.2
3,817,701	-				+0.8
3,817,706	+				+1.2
3,817,706	+				+0.6
3,817,721	+				-0.2
3,817,721	+				+0.6
3,817,721	+				-0.7
3,817,721	+				+0.4
3,817,721	+				+0.3
3,817,721	+				+1.2
3,817,722	-				-0.9
3,817,722	-				-0.3
3,817,722	-				-1.3
3,817,783	+				+0.6
3,817,783	+				+1.2
3,817,784	-				+0.9
3,817,784	-				-0.2
3,817,880	+		IAI47_17975	0.22	-0.4
3,817,880	+		IAI47_17975	0.22	-0.6
3,817,880	+		IAI47_17975	0.22	-0.5
3,817,893	-		IAI47_17975	0.24	+1.1
3,817,893	-		IAI47_17975	0.24	+0.6
3,817,893	-		IAI47_17975	0.24	+0.8
3,817,938	-		IAI47_17975	0.31	+0.6
3,817,989	+		IAI47_17975	0.39	-0.4
3,817,989	+		IAI47_17975	0.39	-1.5
3,817,990	-		IAI47_17975	0.39	+0.8
3,817,990	-		IAI47_17975	0.39	-0.2
3,817,990	-		IAI47_17975	0.39	-0.9
3,817,990	-		IAI47_17975	0.39	-0.9
3,818,086	+		IAI47_17975	0.54	+1.5
3,818,086	+		IAI47_17975	0.54	+2.1
3,818,086	+		IAI47_17975	0.54	+0.2
3,818,086	+		IAI47_17975	0.54	-0.7
3,818,137	+		IAI47_17975	0.62	+1.1
3,818,137	+		IAI47_17975	0.62	-1.6
3,818,138	-		IAI47_17975	0.62	-0.4
3,818,138	-		IAI47_17975	0.62	+1.2
3,818,353	+				+0.4
3,818,353	+				+4.8
3,818,354	-				-0.1
3,818,354	-				+1.4
3,818,354	-				-1.1
3,818,354	-				+1.0
3,818,354	-				+1.1
3,818,359	+				+1.0
3,818,359	+				+0.7
3,818,360	-				+1.4
3,818,360	-				+0.6
3,818,395	-				+0.2
3,818,395	-				-0.4
3,818,463	+		IAI47_17980	0.11	+1.5
3,818,463	+		IAI47_17980	0.11	+0.5
3,818,463	+		IAI47_17980	0.11	-0.1
3,818,463	+		IAI47_17980	0.11	+0.3
3,818,463	+		IAI47_17980	0.11	+0.6
3,818,464	-		IAI47_17980	0.11	+0.2
3,818,464	-		IAI47_17980	0.11	+0.7
3,818,568	+		IAI47_17980	0.25	+0.1
3,818,568	+		IAI47_17980	0.25	-0.4
3,818,569	-		IAI47_17980	0.25	+1.3
3,818,609	-		IAI47_17980	0.31	-0.3
3,818,609	-		IAI47_17980	0.31	+2.1
3,818,706	+		IAI47_17980	0.44	+1.1
3,818,706	+		IAI47_17980	0.44	+0.1
3,818,707	-		IAI47_17980	0.44	+0.9
3,818,707	-		IAI47_17980	0.44	+0.0
3,818,707	-		IAI47_17980	0.44	-0.9
3,818,707	-		IAI47_17980	0.44	-2.5
3,818,707	-		IAI47_17980	0.44	+0.9
3,818,756	+		IAI47_17980	0.51	+0.6
3,818,756	+		IAI47_17980	0.51	+3.8
3,818,757	-		IAI47_17980	0.51	-0.7
3,818,791	+		IAI47_17980	0.55	-0.2
3,818,791	+		IAI47_17980	0.55	-1.5
3,818,791	+		IAI47_17980	0.55	+1.6
3,818,791	+		IAI47_17980	0.55	+0.4
3,818,791	+		IAI47_17980	0.55	+0.9
3,818,791	+		IAI47_17980	0.55	+0.7
3,818,791	+		IAI47_17980	0.55	+0.6
3,818,791	+		IAI47_17980	0.55	+0.8
3,818,791	+		IAI47_17980	0.55	-2.1
3,818,792	-		IAI47_17980	0.55	+1.1
3,818,792	-		IAI47_17980	0.55	+2.2
3,818,792	-		IAI47_17980	0.55	+2.8
3,818,792	-		IAI47_17980	0.55	+1.0
3,818,800	+		IAI47_17980	0.56	+0.8
3,818,800	+		IAI47_17980	0.56	-0.2
3,818,801	-		IAI47_17980	0.57	-0.7
3,818,893	+		IAI47_17980	0.69	-0.1
3,818,894	-		IAI47_17980	0.69	+1.3
3,818,894	-		IAI47_17980	0.69	+1.6
3,818,986	+		IAI47_17980	0.81	-0.4
3,818,986	+		IAI47_17980	0.81	-1.2
3,818,987	-		IAI47_17980	0.82	+2.4
3,818,987	-		IAI47_17980	0.82	+1.1
3,819,028	-		IAI47_17980	0.87	-0.2
3,819,028	-		IAI47_17980	0.87	+1.3
3,819,315	+				+0.1
3,819,315	+				+0.2
3,819,316	-				-0.1
3,819,321	+				-2.1
3,819,321	+				-0.8
3,819,321	+				+0.1
3,819,321	+				+0.8
3,819,322	-				+0.3
3,819,325	-				+0.6
3,819,325	-				-1.7
3,819,325	-				+0.3
3,819,325	-				+0.3
3,819,325	-				-0.1
3,819,362	+		IAI47_17985	0.11	+2.3
3,819,362	+		IAI47_17985	0.11	+3.8
3,819,362	+		IAI47_17985	0.11	+0.2
3,819,363	-		IAI47_17985	0.11	-0.2
3,819,372	+		IAI47_17985	0.12	-1.1
3,819,373	-		IAI47_17985	0.12	-0.9
3,819,374	+		IAI47_17985	0.12	+0.4
3,819,374	+		IAI47_17985	0.12	+1.1
3,819,374	+		IAI47_17985	0.12	+0.6
3,819,375	-		IAI47_17985	0.12	+0.3
3,819,375	-		IAI47_17985	0.12	+0.4
3,819,375	-		IAI47_17985	0.12	+1.2
3,819,396	+		IAI47_17985	0.13	+0.7
3,819,396	+		IAI47_17985	0.13	+1.6
3,819,396	+		IAI47_17985	0.13	+1.3
3,819,396	+		IAI47_17985	0.13	+0.6
3,819,397	-		IAI47_17985	0.13	+1.2
3,819,432	+		IAI47_17985	0.15	-0.5
3,819,432	+		IAI47_17985	0.15	+1.3
3,819,432	+		IAI47_17985	0.15	-0.4
3,819,433	-		IAI47_17985	0.15	+0.9
3,819,433	-		IAI47_17985	0.15	+0.9
3,819,440	+		IAI47_17985	0.15	+0.8
3,819,440	+		IAI47_17985	0.15	-1.2
3,819,440	+		IAI47_17985	0.15	+0.4
3,819,441	-		IAI47_17985	0.15	+1.9
3,819,546	+		IAI47_17985	0.20	-0.2
3,819,546	+		IAI47_17985	0.20	+1.3
3,819,584	+		IAI47_17985	0.22	-0.9
3,819,584	+		IAI47_17985	0.22	-0.2
3,819,607	-		IAI47_17985	0.23	-0.7
3,819,648	+		IAI47_17985	0.25	+1.4
3,819,648	+		IAI47_17985	0.25	-0.1
3,819,649	-		IAI47_17985	0.25	+0.3
3,819,660	+		IAI47_17985	0.26	+1.2
3,819,660	+		IAI47_17985	0.26	+0.8
3,819,660	+		IAI47_17985	0.26	+0.2
3,819,660	+		IAI47_17985	0.26	+1.8
3,819,661	-		IAI47_17985	0.26	-0.2
3,819,661	-		IAI47_17985	0.26	+0.1
3,819,661	-		IAI47_17985	0.26	-1.7
3,819,661	-		IAI47_17985	0.26	-0.9
3,819,661	-		IAI47_17985	0.26	+1.1
3,819,661	-		IAI47_17985	0.26	+1.3
3,819,661	-		IAI47_17985	0.26	+0.3
3,819,750	+		IAI47_17985	0.30	-1.6
3,819,751	-		IAI47_17985	0.30	-1.3
3,819,751	-		IAI47_17985	0.30	+1.1
3,819,779	+		IAI47_17985	0.31	+1.2
3,819,789	+		IAI47_17985	0.32	+0.1
3,819,789	+		IAI47_17985	0.32	-0.3
3,819,789	+		IAI47_17985	0.32	-0.7
3,819,789	+		IAI47_17985	0.32	-0.4
3,819,789	+		IAI47_17985	0.32	-0.2
3,819,789	+		IAI47_17985	0.32	+0.2
3,819,790	-		IAI47_17985	0.32	-0.2
3,819,790	-		IAI47_17985	0.32	+0.9
3,819,790	-		IAI47_17985	0.32	-0.2
3,819,790	-		IAI47_17985	0.32	-0.7
3,819,790	-		IAI47_17985	0.32	+0.7
3,819,790	-		IAI47_17985	0.32	+1.6
3,819,804	+		IAI47_17985	0.33	+1.1
3,819,864	+		IAI47_17985	0.35	-1.0
3,819,864	+		IAI47_17985	0.35	-0.0
3,819,864	+		IAI47_17985	0.35	-0.7
3,819,864	+		IAI47_17985	0.35	+3.3
3,819,864	+		IAI47_17985	0.35	+2.1
3,819,864	+		IAI47_17985	0.35	-0.2
3,819,864	+		IAI47_17985	0.35	+1.6
3,819,865	-		IAI47_17985	0.35	+1.2
3,819,865	-		IAI47_17985	0.35	+1.7
3,819,865	-		IAI47_17985	0.35	+1.0
3,819,865	-		IAI47_17985	0.35	-0.3
3,819,865	-		IAI47_17985	0.35	+0.3
3,819,865	-		IAI47_17985	0.35	+0.1
3,819,901	-		IAI47_17985	0.37	+2.2
3,819,914	+		IAI47_17985	0.38	-0.2
3,819,915	-		IAI47_17985	0.38	-0.4
3,819,915	-		IAI47_17985	0.38	-0.2
3,819,920	+		IAI47_17985	0.38	-0.3
3,819,920	+		IAI47_17985	0.38	-0.6
3,819,920	+		IAI47_17985	0.38	-0.7
3,819,921	-		IAI47_17985	0.38	-1.6
3,819,921	-		IAI47_17985	0.38	-0.5
3,819,921	-		IAI47_17985	0.38	+1.3
3,819,921	-		IAI47_17985	0.38	+0.8
3,819,942	-		IAI47_17985	0.39	+0.2
3,819,994	-		IAI47_17985	0.42	+1.1
3,819,994	-		IAI47_17985	0.42	-1.1
3,819,994	-		IAI47_17985	0.42	-1.9
3,819,995	+		IAI47_17985	0.42	+0.2
3,819,995	+		IAI47_17985	0.42	+0.5
3,819,996	-		IAI47_17985	0.42	+0.4
3,820,033	+		IAI47_17985	0.44	+2.2
3,820,033	+		IAI47_17985	0.44	+1.0
3,820,062	+		IAI47_17985	0.45	+0.9
3,820,062	+		IAI47_17985	0.45	+1.0
3,820,063	-		IAI47_17985	0.45	-0.6
3,820,113	+		IAI47_17985	0.47	+1.3
3,820,113	+		IAI47_17985	0.47	+0.5
3,820,113	+		IAI47_17985	0.47	+1.4
3,820,113	+		IAI47_17985	0.47	+0.9
3,820,113	+		IAI47_17985	0.47	-0.7
3,820,113	+		IAI47_17985	0.47	-2.1
3,820,114	-		IAI47_17985	0.47	+0.3
3,820,114	-		IAI47_17985	0.47	+0.2
3,820,114	-		IAI47_17985	0.47	+0.7
3,820,114	-		IAI47_17985	0.47	+1.1
3,820,114	-		IAI47_17985	0.47	+0.9
3,820,114	-		IAI47_17985	0.47	+0.9
3,820,114	-		IAI47_17985	0.47	+0.2
3,820,114	-		IAI47_17985	0.47	+0.1
3,820,114	-		IAI47_17985	0.47	+0.5
3,820,114	-		IAI47_17985	0.47	+0.5