Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22590

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
5,179,847	+		HSERO_RS22585	0.64	+0.3
5,179,890	-		HSERO_RS22585	0.66	-0.6
5,179,918	+		HSERO_RS22585	0.68	+0.1
5,179,938	-		HSERO_RS22585	0.69	-1.5
5,180,028	-		HSERO_RS22585	0.73	+1.5
5,180,161	-		HSERO_RS22585	0.81	-0.4
5,180,219	-		HSERO_RS22585	0.84	-0.5
5,180,277	-		HSERO_RS22585	0.87	+0.3
5,180,469	+				-0.9
5,180,505	-				+0.5
5,180,695	+				+0.5
5,181,042	-		HSERO_RS22590	0.30	+0.5
5,181,052	-		HSERO_RS22590	0.32	-0.6
5,181,102	+		HSERO_RS22590	0.39	-0.7
5,181,113	+		HSERO_RS22590	0.41	-0.2
5,181,266	+		HSERO_RS22590	0.63	-0.8
5,181,277	+		HSERO_RS22590	0.64	-0.8
5,181,399	-		HSERO_RS22590	0.82	-0.6
5,181,433	+				+1.6
5,181,433	+		HSERO_RS22590	0.87	-2.2
5,181,459	+				-0.4
5,181,467	-				+0.8
5,181,467	-				-1.7
5,181,472	-				-0.3
5,181,472	-				+1.6
5,181,497	-				-3.8
5,181,630	-				-0.0
5,181,665	+				+1.3
5,181,666	+				-0.7
5,181,778	+				+0.1
5,181,812	-				+0.7
5,181,818	+				+0.0
5,181,826	-		HSERO_RS22595	0.13	+0.4
5,181,850	-		HSERO_RS22595	0.23	+0.0
5,181,850	-		HSERO_RS22595	0.23	+1.3
5,181,893	+		HSERO_RS22595	0.40	+0.1
5,181,972	+		HSERO_RS22595	0.73	+0.7
5,182,031	+				-0.0
5,182,271	+		HSERO_RS22600	0.50	-1.1
5,182,271	+		HSERO_RS22600	0.50	-0.9
5,182,425	+				+0.4