Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20880

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
4,776,077	-				+0.3
4,776,219	-		HSERO_RS20875	0.24	+0.7
4,776,302	-		HSERO_RS20875	0.35	+0.1
4,776,332	+		HSERO_RS20875	0.39	+1.9
4,776,413	-		HSERO_RS20875	0.50	-1.0
4,776,416	+		HSERO_RS20875	0.50	-3.2
4,776,424	-		HSERO_RS20875	0.51	-0.6
4,776,457	+		HSERO_RS20875	0.56	+0.7
4,776,525	+		HSERO_RS20875	0.64	-0.3
4,776,589	-		HSERO_RS20875	0.73	+1.6
4,776,595	-		HSERO_RS20875	0.74	+0.6
4,776,717	-		HSERO_RS20875	0.90	-2.0
4,776,841	-				+0.2
4,776,901	-				-0.2
4,776,903	+				+0.1
4,776,930	-				-2.4
4,776,930	-				+1.0
4,776,998	-		HSERO_RS20880	0.14	-1.3
4,777,219	-		HSERO_RS20880	0.44	-0.6
4,777,219	-		HSERO_RS20880	0.44	-1.6
4,777,231	-		HSERO_RS20880	0.45	-1.1
4,777,231	-		HSERO_RS20880	0.45	-0.4
4,777,231	-		HSERO_RS20880	0.45	+1.2
4,777,231	-		HSERO_RS20880	0.45	+0.3
4,777,270	+		HSERO_RS20880	0.51	-0.3
4,777,383	+		HSERO_RS20880	0.66	+0.2
4,777,553	-		HSERO_RS20880	0.88	+0.3
4,777,560	-		HSERO_RS20880	0.89	-1.5
4,777,648	+				+1.2
4,777,662	+				+0.5
4,777,703	-				+1.0
4,777,888	+		HSERO_RS20885	0.17	-1.5
4,778,117	+		HSERO_RS20885	0.36	-0.3
4,778,117	+		HSERO_RS20885	0.36	-2.8
4,778,260	+		HSERO_RS20885	0.48	-0.9
4,778,422	-		HSERO_RS20885	0.61	-2.3