Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20135

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
4,622,208	-		HSERO_RS20130	0.75	+1.6
4,622,223	+		HSERO_RS20130	0.76	-1.4
4,622,324	-		HSERO_RS20130	0.78	-0.9
4,622,774	-				+0.3
4,622,908	-				-0.6
4,622,910	+				+0.4
4,622,998	+				-0.0
4,623,028	-				+0.9
4,623,236	-				+0.4
4,623,965	-		HSERO_RS20135	0.83	-2.2
4,623,983	+				+3.4
4,624,014	+		HSERO_RS20135	0.88	-1.7
4,624,034	+				-0.4
4,624,201	-				+0.1
4,624,240	+		HSERO_RS20140	0.13	+1.0
4,624,248	-		HSERO_RS20140	0.14	-0.2
4,624,265	+		HSERO_RS20140	0.16	+0.3
4,624,273	-		HSERO_RS20140	0.17	-1.3
4,624,302	+		HSERO_RS20140	0.21	-0.2
4,624,330	+		HSERO_RS20140	0.24	+0.5
4,624,378	-		HSERO_RS20140	0.30	-0.2
4,624,429	-		HSERO_RS20140	0.36	+0.6
4,624,559	-		HSERO_RS20140	0.52	+0.2
4,624,593	+		HSERO_RS20140	0.57	-0.5
4,624,600	+		HSERO_RS20140	0.58	-0.2
4,624,796	+		HSERO_RS20140	0.82	-1.2
4,624,867	+				-0.4
4,624,867	+				-0.4
4,624,955	-				+1.3
4,625,050	+				-0.4
4,625,104	-				+0.8