Experiment: Fusidic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18865 and HSERO_RS18870 are separated by 61 nucleotides HSERO_RS18870 and HSERO_RS18875 are separated by 1 nucleotides HSERO_RS18875 and HSERO_RS18880 are separated by 685 nucleotides
HSERO_RS18865: HSERO_RS18865 - potassium-transporting ATPase subunit B, at 4,327,840 to 4,330,032
_RS18865
HSERO_RS18870: HSERO_RS18870 - ATPase, at 4,330,094 to 4,331,875
_RS18870
HSERO_RS18875: HSERO_RS18875 - ATPase, at 4,331,877 to 4,331,966
_RS18875
HSERO_RS18880: HSERO_RS18880 - diguanylate cyclase, at 4,332,652 to 4,334,868
_RS18880
Position (kb) 4330
4331
4332 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4329.291 kb on + strand, within HSERO_RS18865 at 4329.317 kb on + strand, within HSERO_RS18865 at 4329.365 kb on + strand, within HSERO_RS18865 at 4329.522 kb on + strand, within HSERO_RS18865 at 4329.557 kb on + strand, within HSERO_RS18865 at 4329.557 kb on + strand, within HSERO_RS18865 at 4329.557 kb on + strand, within HSERO_RS18865 at 4329.557 kb on + strand, within HSERO_RS18865 at 4329.565 kb on - strand, within HSERO_RS18865 at 4329.565 kb on - strand, within HSERO_RS18865 at 4329.791 kb on + strand, within HSERO_RS18865 at 4329.899 kb on - strand at 4329.913 kb on + strand at 4329.958 kb on + strand at 4329.989 kb on - strand at 4330.470 kb on - strand, within HSERO_RS18870 at 4330.509 kb on - strand, within HSERO_RS18870 at 4330.517 kb on - strand, within HSERO_RS18870 at 4330.701 kb on + strand, within HSERO_RS18870 at 4330.712 kb on + strand, within HSERO_RS18870 at 4330.886 kb on - strand, within HSERO_RS18870 at 4330.935 kb on + strand, within HSERO_RS18870 at 4331.054 kb on - strand, within HSERO_RS18870 at 4331.054 kb on - strand, within HSERO_RS18870 at 4331.143 kb on - strand, within HSERO_RS18870 at 4331.190 kb on + strand, within HSERO_RS18870 at 4331.203 kb on + strand, within HSERO_RS18870 at 4331.203 kb on + strand, within HSERO_RS18870 at 4331.203 kb on + strand, within HSERO_RS18870 at 4331.211 kb on - strand, within HSERO_RS18870 at 4331.250 kb on - strand, within HSERO_RS18870 at 4331.364 kb on + strand, within HSERO_RS18870 at 4331.518 kb on - strand, within HSERO_RS18870 at 4331.577 kb on + strand, within HSERO_RS18870 at 4331.672 kb on + strand, within HSERO_RS18870 at 4331.847 kb on - strand at 4331.862 kb on - strand at 4331.898 kb on - strand, within HSERO_RS18875 at 4332.041 kb on + strand at 4332.115 kb on - strand at 4332.242 kb on + strand at 4332.289 kb on - strand at 4332.546 kb on - strand at 4332.620 kb on - strand at 4332.804 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.025 mg/ml remove 4,329,291 + HSERO_RS18865 0.66 -3.2 4,329,317 + HSERO_RS18865 0.67 -0.1 4,329,365 + HSERO_RS18865 0.70 -1.2 4,329,522 + HSERO_RS18865 0.77 -0.9 4,329,557 + HSERO_RS18865 0.78 -1.8 4,329,557 + HSERO_RS18865 0.78 -0.9 4,329,557 + HSERO_RS18865 0.78 -0.0 4,329,557 + HSERO_RS18865 0.78 -1.8 4,329,565 - HSERO_RS18865 0.79 -1.1 4,329,565 - HSERO_RS18865 0.79 +0.5 4,329,791 + HSERO_RS18865 0.89 +0.3 4,329,899 - +1.2 4,329,913 + +0.4 4,329,958 + +0.4 4,329,989 - -0.4 4,330,470 - HSERO_RS18870 0.21 +0.3 4,330,509 - HSERO_RS18870 0.23 -1.1 4,330,517 - HSERO_RS18870 0.24 +0.0 4,330,701 + HSERO_RS18870 0.34 +0.3 4,330,712 + HSERO_RS18870 0.35 -0.7 4,330,886 - HSERO_RS18870 0.44 -1.9 4,330,935 + HSERO_RS18870 0.47 -3.4 4,331,054 - HSERO_RS18870 0.54 +0.1 4,331,054 - HSERO_RS18870 0.54 -0.5 4,331,143 - HSERO_RS18870 0.59 -0.7 4,331,190 + HSERO_RS18870 0.62 -0.5 4,331,203 + HSERO_RS18870 0.62 +0.7 4,331,203 + HSERO_RS18870 0.62 +0.7 4,331,203 + HSERO_RS18870 0.62 -3.1 4,331,211 - HSERO_RS18870 0.63 -0.4 4,331,250 - HSERO_RS18870 0.65 -0.6 4,331,364 + HSERO_RS18870 0.71 +0.3 4,331,518 - HSERO_RS18870 0.80 -0.7 4,331,577 + HSERO_RS18870 0.83 -0.2 4,331,672 + HSERO_RS18870 0.89 -0.3 4,331,847 - +0.5 4,331,862 - -0.3 4,331,898 - HSERO_RS18875 0.23 -0.8 4,332,041 + -0.8 4,332,115 - -1.7 4,332,242 + +0.0 4,332,289 - +0.4 4,332,546 - +0.6 4,332,620 - -1.7 4,332,804 - -0.2
Or see this region's nucleotide sequence