Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS17310

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
3,964,842	+				-1.4
3,964,984	+		HSERO_RS17305	0.15	+1.4
3,965,220	+		HSERO_RS17305	0.43	-2.0
3,965,234	+		HSERO_RS17305	0.45	+0.1
3,965,285	+		HSERO_RS17305	0.51	+2.2
3,965,369	+		HSERO_RS17305	0.61	+1.1
3,965,452	-		HSERO_RS17305	0.71	+0.6
3,965,495	+		HSERO_RS17305	0.76	+0.4
3,965,549	+				+1.2
3,965,608	+				-1.2
3,965,616	-				-2.6
3,965,675	+				+1.2
3,965,683	-				+0.5
3,965,723	+				-1.8
3,965,802	-				+0.5
3,965,826	+				+0.1
3,965,834	+				-0.8
3,965,935	-				+0.5
3,965,948	+				-1.4
3,965,982	-		HSERO_RS17310	0.12	+0.4
3,965,982	-		HSERO_RS17310	0.12	+0.4
3,966,131	+		HSERO_RS17310	0.23	+1.6
3,966,225	-		HSERO_RS17310	0.29	-0.4
3,966,338	-		HSERO_RS17310	0.37	-0.5
3,966,345	+		HSERO_RS17310	0.37	+1.2
3,966,402	+		HSERO_RS17310	0.41	+0.6
3,966,410	-		HSERO_RS17310	0.42	-0.6
3,966,500	+		HSERO_RS17310	0.48	-0.1
3,966,547	+		HSERO_RS17310	0.51	+0.3
3,966,639	-		HSERO_RS17310	0.58	+0.7
3,966,739	-		HSERO_RS17310	0.64	-0.4
3,966,928	-		HSERO_RS17310	0.77	-1.5
3,966,929	+		HSERO_RS17310	0.77	+1.6
3,966,929	+		HSERO_RS17310	0.77	+0.8
3,967,037	-		HSERO_RS17310	0.85	-0.2
3,967,047	+		HSERO_RS17310	0.86	-0.9
3,967,057	+		HSERO_RS17310	0.86	-0.3
3,967,121	-				+1.1
3,967,166	+				-1.1
3,967,168	+				+0.4
3,967,176	-				+0.3
3,967,176	-				+0.2
3,967,287	+				-1.8
3,967,297	+				+0.4
3,967,297	+				-3.1
3,967,297	+				-2.4
3,967,348	-				+0.8
3,967,363	-				-2.4
3,967,405	+				-2.6
3,967,667	+				-1.6
3,967,677	+				+1.2
3,967,744	+		HSERO_RS17315	0.11	-3.2
3,967,927	-		HSERO_RS17315	0.16	-4.4
3,967,957	+		HSERO_RS17315	0.17	-2.0
3,967,971	+		HSERO_RS17315	0.17	-4.4
3,968,188	-		HSERO_RS17315	0.22	-1.4
3,968,193	-		HSERO_RS17315	0.22	-2.7
3,968,247	+		HSERO_RS17315	0.24	-1.4