Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15300

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
3,505,069	-		HSERO_RS15295	0.46	+0.2
3,505,081	+		HSERO_RS15295	0.47	+1.0
3,505,182	+		HSERO_RS15295	0.53	-1.0
3,505,190	-		HSERO_RS15295	0.53	-0.0
3,505,210	-		HSERO_RS15295	0.54	+0.1
3,505,395	+		HSERO_RS15295	0.65	+0.8
3,505,442	+		HSERO_RS15295	0.68	-3.1
3,505,477	+		HSERO_RS15295	0.70	-0.4
3,505,506	-		HSERO_RS15295	0.72	-3.6
3,505,680	+		HSERO_RS15295	0.82	+0.8
3,505,690	+		HSERO_RS15295	0.82	-1.6
3,505,849	+				+0.9
3,505,849	+				+0.1
3,505,849	+				-0.9
3,505,958	-				-0.1
3,505,997	+				-0.6
3,505,997	+				-0.2
3,505,997	+				-2.3
3,506,033	+				+1.0
3,506,149	-		HSERO_RS15300	0.13	+0.5
3,506,159	-		HSERO_RS15300	0.14	+2.7
3,506,186	-		HSERO_RS15300	0.18	-0.2
3,506,250	+		HSERO_RS15300	0.28	-1.8
3,506,250	+		HSERO_RS15300	0.28	-0.3
3,506,258	-		HSERO_RS15300	0.29	+0.5
3,506,258	-		HSERO_RS15300	0.29	-1.1
3,506,280	+		HSERO_RS15300	0.32	+1.0
3,506,280	+		HSERO_RS15300	0.32	+0.6
3,506,288	-		HSERO_RS15300	0.33	-0.2
3,506,288	-		HSERO_RS15300	0.33	-0.4
3,506,293	-		HSERO_RS15300	0.34	-0.2
3,506,298	+		HSERO_RS15300	0.34	+0.5
3,506,303	-		HSERO_RS15300	0.35	+0.7
3,506,336	+		HSERO_RS15300	0.40	-1.5
3,506,353	-		HSERO_RS15300	0.42	+1.1
3,506,382	-		HSERO_RS15300	0.47	+1.6
3,506,445	-		HSERO_RS15300	0.56	+0.4
3,506,445	-		HSERO_RS15300	0.56	-1.6
3,506,445	-		HSERO_RS15300	0.56	+0.3
3,506,455	-		HSERO_RS15300	0.57	+3.2
3,506,580	+		HSERO_RS15300	0.75	-0.2
3,506,766	+				+0.3
3,506,952	+		HSERO_RS15305	0.25	-2.0
3,506,965	-		HSERO_RS15305	0.27	-1.4
3,507,037	-		HSERO_RS15305	0.39	+0.1
3,507,116	+		HSERO_RS15305	0.51	+0.7
3,507,140	-		HSERO_RS15305	0.55	-0.6
3,507,192	+		HSERO_RS15305	0.63	-1.1
3,507,224	+		HSERO_RS15305	0.68	-1.5
3,507,224	+		HSERO_RS15305	0.68	-1.0
3,507,238	-		HSERO_RS15305	0.70	-1.7
3,507,618	+		HSERO_RS15310	0.18	-0.9
3,507,646	+		HSERO_RS15310	0.21	+0.2
3,507,654	-				-0.6
3,507,654	-				+2.2