Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15010

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
3,408,217	+				+0.8
3,408,235	-				-2.9
3,408,264	+				+0.3
3,408,269	+				+0.2
3,408,291	+				+1.0
3,408,388	+				-0.3
3,408,388	+				+0.7
3,408,396	-				+0.9
3,408,396	-				-2.1
3,408,472	-				+0.0
3,408,472	-				-0.3
3,408,530	+				+0.8
3,408,561	+				-0.6
3,408,607	-				-1.8
3,408,630	+		HSERO_RS15010	0.12	-0.1
3,408,675	-		HSERO_RS15010	0.17	+1.1
3,408,707	+		HSERO_RS15010	0.21	+1.3
3,408,723	-		HSERO_RS15010	0.23	-0.2
3,408,851	+		HSERO_RS15010	0.37	-0.3
3,408,851	+		HSERO_RS15010	0.37	-0.3
3,408,862	+		HSERO_RS15010	0.39	-1.7
3,408,927	+		HSERO_RS15010	0.46	-0.5
3,409,150	-		HSERO_RS15010	0.72	+0.2
3,409,189	-		HSERO_RS15010	0.76	-1.2
3,409,259	+		HSERO_RS15010	0.84	-1.2
3,409,262	-		HSERO_RS15010	0.85	-0.5
3,409,267	-		HSERO_RS15010	0.85	-0.5
3,409,267	-		HSERO_RS15010	0.85	-0.4
3,409,283	-		HSERO_RS15010	0.87	+0.9
3,409,320	-				+0.4
3,409,342	+				-1.9
3,409,375	+				-0.1
3,409,391	+				-0.7
3,409,452	-				+0.8
3,409,452	-				+1.2
3,409,485	+				-0.6
3,409,620	-		HSERO_RS15015	0.29	+0.4
3,409,664	+		HSERO_RS15015	0.36	-0.0
3,409,731	+		HSERO_RS15015	0.46	+1.5
3,409,938	+		HSERO_RS15015	0.76	+0.2
3,409,951	-		HSERO_RS15015	0.78	-0.1
3,410,022	+		HSERO_RS15015	0.89	-0.9
3,410,185	-		HSERO_RS15020	0.11	+0.6
3,410,245	-		HSERO_RS15020	0.21	+0.6
3,410,264	-		HSERO_RS15020	0.24	-2.3
3,410,302	+		HSERO_RS15020	0.30	+0.5