Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14470

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
3,280,446	-		HSERO_RS14465	0.39	+0.5
3,280,554	-		HSERO_RS14465	0.48	+0.1
3,280,567	-		HSERO_RS14465	0.49	+0.6
3,280,972	-		HSERO_RS14465	0.85	+2.5
3,281,008	+		HSERO_RS14465	0.88	-0.1
3,281,012	+		HSERO_RS14465	0.88	+0.6
3,281,013	+		HSERO_RS14465	0.88	+0.7
3,281,015	-		HSERO_RS14465	0.89	+0.6
3,281,015	-		HSERO_RS14465	0.89	-0.1
3,281,111	-				-0.8
3,281,343	+				+0.0
3,281,349	+				-0.7
3,281,351	-				-0.8
3,281,351	-				-0.4
3,281,351	-				-0.7
3,281,351	-				+0.5
3,281,698	+		HSERO_RS14470	0.27	-2.7
3,281,748	+		HSERO_RS14470	0.31	-0.3
3,281,771	-		HSERO_RS14470	0.33	+0.3
3,282,147	+		HSERO_RS14470	0.66	-0.5
3,282,155	-		HSERO_RS14470	0.67	-0.2
3,282,209	+		HSERO_RS14470	0.72	-0.6
3,282,439	-				+0.2
3,282,453	-				-0.6
3,282,623	-				-0.9
3,282,713	-				+1.0
3,282,772	+		HSERO_RS14475	0.25	-2.2
3,282,804	-		HSERO_RS14475	0.29	-2.1
3,283,076	+		HSERO_RS14475	0.64	+0.8
3,283,076	+		HSERO_RS14475	0.64	-1.2
3,283,109	+		HSERO_RS14475	0.68	+0.6
3,283,130	+		HSERO_RS14475	0.71	-2.1
3,283,337	-				+0.1
3,283,363	+				+0.7
3,283,439	+				+0.0
3,283,464	+				-0.6
3,283,519	+		HSERO_RS14480	0.18	+0.3
3,283,524	+		HSERO_RS14480	0.18	-0.5