Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13825

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
3,143,458	-		HSERO_RS13820	0.57	+0.9
3,143,468	-		HSERO_RS13820	0.57	+1.2
3,143,541	+		HSERO_RS13820	0.62	-0.8
3,143,742	+		HSERO_RS13820	0.75	-0.7
3,143,787	-		HSERO_RS13820	0.78	+1.1
3,143,968	-				-1.7
3,144,264	+				+0.1
3,144,275	+				-3.2
3,144,275	+				+0.3
3,144,280	+				+0.1
3,144,283	-				+0.4
3,144,300	+				-2.1
3,144,308	-				+0.2
3,144,475	-				+0.2
3,144,539	+		HSERO_RS13825	0.10	-0.7
3,144,539	+		HSERO_RS13825	0.10	+0.1
3,144,547	-		HSERO_RS13825	0.11	+0.1
3,144,747	+		HSERO_RS13825	0.18	-0.7
3,144,870	+		HSERO_RS13825	0.22	+0.9
3,144,880	-		HSERO_RS13825	0.23	-0.6
3,144,909	+		HSERO_RS13825	0.24	-0.1
3,145,057	+		HSERO_RS13825	0.29	-0.3
3,145,096	-		HSERO_RS13825	0.31	-0.2
3,145,210	+		HSERO_RS13825	0.35	-1.0
3,145,283	+		HSERO_RS13825	0.37	-0.1
3,145,327	-		HSERO_RS13825	0.39	+0.2
3,145,359	-				+3.1
3,145,523	+		HSERO_RS13825	0.46	+0.3
3,145,531	-		HSERO_RS13825	0.46	+0.2
3,145,577	+		HSERO_RS13825	0.48	-1.1
3,145,602	+		HSERO_RS13825	0.49	-0.3
3,145,733	-		HSERO_RS13825	0.53	-0.4
3,145,837	-		HSERO_RS13825	0.57	-3.4
3,145,837	-		HSERO_RS13825	0.57	-1.9
3,145,955	+		HSERO_RS13825	0.61	-0.1
3,146,214	+		HSERO_RS13825	0.71	-0.9
3,146,255	-		HSERO_RS13825	0.72	-0.3
3,146,419	+		HSERO_RS13825	0.78	-1.4
3,146,597	+		HSERO_RS13825	0.85	-0.0
3,146,968	+				+0.7
3,147,054	+				+0.1
3,147,127	-		HSERO_RS13830	0.38	+2.1
3,147,182	-		HSERO_RS13830	0.60	-0.0
3,147,199	+		HSERO_RS13830	0.66	-0.9
3,147,380	-				+0.7
3,147,390	+				+1.8
3,147,581	+		HSERO_RS13835	0.35	-0.5
3,147,717	+		HSERO_RS13835	0.53	+0.3
3,147,725	-		HSERO_RS13835	0.54	+0.4
3,147,725	-		HSERO_RS13835	0.54	-0.2
3,147,757	+		HSERO_RS13835	0.58	+0.4
3,147,765	-		HSERO_RS13835	0.59	-0.7
3,147,845	+		HSERO_RS13835	0.70	-0.1
3,147,929	+		HSERO_RS13835	0.81	-2.5