Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12555

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
2,862,319	+		HSERO_RS12550	0.37	+0.4
2,862,445	-		HSERO_RS12550	0.49	-0.2
2,862,534	+		HSERO_RS12550	0.58	+0.8
2,862,726	+		HSERO_RS12550	0.78	-0.5
2,862,827	+		HSERO_RS12550	0.88	+0.0
2,862,886	+				+0.2
2,862,911	+				+0.6
2,863,066	-				-1.5
2,863,082	+				+0.8
2,863,130	-				+1.4
2,863,260	+				+0.2
2,863,302	-				+0.1
2,863,325	+				+0.7
2,863,325	+				+0.2
2,863,325	+				-1.5
2,863,346	-				+1.0
2,863,450	-				-0.8
2,863,494	+		HSERO_RS12555	0.16	-2.7
2,863,494	+		HSERO_RS12555	0.16	+1.0
2,863,559	-		HSERO_RS12555	0.21	+0.7
2,863,595	-		HSERO_RS12555	0.24	+0.2
2,863,679	-		HSERO_RS12555	0.31	+1.4
2,864,004	+		HSERO_RS12555	0.56	-0.1
2,864,121	+		HSERO_RS12555	0.65	+0.6
2,864,165	+				-1.2
2,864,173	-		HSERO_RS12555	0.69	-0.1
2,864,434	-		HSERO_RS12555	0.89	+0.4
2,864,496	+				-0.8
2,864,661	-				-1.6
2,864,661	-				+0.9
2,864,727	-		HSERO_RS12560	0.13	-0.8
2,864,822	+		HSERO_RS12560	0.37	-0.5
2,864,844	+				-0.2
2,864,859	+		HSERO_RS12560	0.46	-0.8
2,864,962	+		HSERO_RS12560	0.72	-1.2
2,864,962	+		HSERO_RS12560	0.72	-0.1
2,864,970	-		HSERO_RS12560	0.74	-2.4
2,865,021	-		HSERO_RS12560	0.87	+0.0
2,865,086	+				+0.3
2,865,119	+		HSERO_RS12565	0.14	+1.0
2,865,133	-		HSERO_RS12565	0.18	-2.2
2,865,138	-		HSERO_RS12565	0.20	-0.0
2,865,393	-				-0.2
2,865,424	-				-0.1
2,865,507	-				+1.4