Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06815

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
1,545,695	-		HSERO_RS06810	0.22	-0.6
1,545,701	+		HSERO_RS06810	0.22	-0.3
1,545,704	-		HSERO_RS06810	0.22	-0.0
1,545,756	-				-0.9
1,545,764	-				+2.1
1,545,774	+		HSERO_RS06810	0.28	-0.5
1,545,777	-		HSERO_RS06810	0.28	-1.6
1,545,779	+		HSERO_RS06810	0.29	+0.6
1,545,936	-		HSERO_RS06810	0.42	+0.3
1,546,050	-		HSERO_RS06810	0.51	-0.6
1,546,050	-		HSERO_RS06810	0.51	+0.5
1,546,052	+		HSERO_RS06810	0.51	+0.9
1,546,076	+		HSERO_RS06810	0.53	-0.7
1,546,092	+		HSERO_RS06810	0.55	-3.2
1,546,100	-		HSERO_RS06810	0.55	-0.4
1,546,180	-		HSERO_RS06810	0.62	-4.1
1,546,206	+		HSERO_RS06810	0.64	-0.2
1,546,206	+		HSERO_RS06810	0.64	-0.7
1,546,432	+		HSERO_RS06810	0.83	+1.5
1,546,433	-		HSERO_RS06810	0.83	-1.5
1,546,465	+		HSERO_RS06810	0.86	-1.4
1,546,554	+				+0.1
1,546,554	+				-0.4
1,546,584	-				-0.0
1,546,602	-				+1.3
1,546,607	-				-0.4
1,546,889	+				+0.2
1,547,016	-		HSERO_RS06815	0.11	-0.4
1,547,051	+		HSERO_RS06815	0.13	-1.6
1,547,077	-		HSERO_RS06815	0.13	+0.6
1,547,106	+		HSERO_RS06815	0.14	-1.7
1,547,209	+		HSERO_RS06815	0.18	-1.3
1,547,219	+		HSERO_RS06815	0.18	+0.2
1,547,253	+		HSERO_RS06815	0.19	-3.9
1,547,344	-		HSERO_RS06815	0.22	-0.4
1,547,426	+		HSERO_RS06815	0.24	+0.7
1,547,431	+		HSERO_RS06815	0.25	-0.2
1,547,831	-		HSERO_RS06815	0.37	-0.6
1,547,862	-		HSERO_RS06815	0.38	-0.1
1,547,880	+		HSERO_RS06815	0.39	-2.2
1,547,908	+		HSERO_RS06815	0.40	+0.0
1,547,960	+		HSERO_RS06815	0.41	-0.3
1,548,120	+		HSERO_RS06815	0.47	+0.9
1,548,142	+		HSERO_RS06815	0.47	-0.2
1,548,233	-		HSERO_RS06815	0.50	-0.2
1,548,288	-		HSERO_RS06815	0.52	+0.5
1,548,367	+		HSERO_RS06815	0.54	+0.1
1,548,663	+		HSERO_RS06815	0.64	-0.9
1,548,712	+		HSERO_RS06815	0.65	+0.7
1,548,726	+		HSERO_RS06815	0.66	+0.7
1,548,807	-				+3.7
1,548,867	+		HSERO_RS06815	0.70	+1.5
1,548,929	-		HSERO_RS06815	0.72	+0.1
1,548,980	-		HSERO_RS06815	0.74	-0.9
1,549,004	-		HSERO_RS06815	0.75	+1.9
1,549,102	+		HSERO_RS06815	0.78	-0.1
1,549,218	-		HSERO_RS06815	0.81	+0.1
1,549,284	-		HSERO_RS06815	0.83	+1.8
1,549,457	+		HSERO_RS06815	0.89	+0.2
1,549,571	+				+0.7
1,549,590	+				-0.7
1,549,616	+				+0.7
1,549,831	+				+0.7
1,549,882	+				+0.9
1,550,026	+		HSERO_RS06820	0.12	+0.7
1,550,062	+		HSERO_RS06820	0.15	+0.1
1,550,062	+		HSERO_RS06820	0.15	+0.1
1,550,062	+		HSERO_RS06820	0.15	-0.8
1,550,065	-		HSERO_RS06820	0.15	-1.0
1,550,173	+		HSERO_RS06820	0.22	+0.9
1,550,181	-		HSERO_RS06820	0.23	-3.4
1,550,208	+		HSERO_RS06820	0.25	-0.3
1,550,216	-		HSERO_RS06820	0.25	-0.4
1,550,216	-		HSERO_RS06820	0.25	+0.1
1,550,230	+		HSERO_RS06820	0.26	-1.5
1,550,292	-		HSERO_RS06820	0.31	+1.6
1,550,423	-		HSERO_RS06820	0.40	+0.1
1,550,516	-		HSERO_RS06820	0.46	+0.8
1,550,541	-		HSERO_RS06820	0.48	-0.0
1,550,546	+		HSERO_RS06820	0.48	+0.4
1,550,554	-		HSERO_RS06820	0.49	-1.3
1,550,554	-		HSERO_RS06820	0.49	+1.0
1,550,638	-		HSERO_RS06820	0.54	+2.7
1,550,688	-		HSERO_RS06820	0.58	+0.7
1,550,732	-		HSERO_RS06820	0.61	-1.4
1,550,794	+				+1.1