Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06480

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
1,462,934	+		HSERO_RS06475	0.28	-1.0
1,462,942	-		HSERO_RS06475	0.28	-0.3
1,463,044	+		HSERO_RS06475	0.39	-0.0
1,463,046	+		HSERO_RS06475	0.40	+0.0
1,463,070	-		HSERO_RS06475	0.42	-1.1
1,463,240	-		HSERO_RS06475	0.60	-0.1
1,463,364	+		HSERO_RS06475	0.74	-0.5
1,463,527	+				-0.7
1,463,535	-				-0.3
1,463,535	-				-0.2
1,463,635	+				-0.1
1,463,840	-				-0.2
1,463,904	+				+0.9
1,463,975	-				-0.5
1,464,050	+		HSERO_RS06480	0.10	-1.5
1,464,098	-		HSERO_RS06480	0.13	-0.4
1,464,103	+		HSERO_RS06480	0.14	-0.1
1,464,111	-		HSERO_RS06480	0.14	-0.2
1,464,174	+		HSERO_RS06480	0.18	-1.0
1,464,324	+		HSERO_RS06480	0.26	+0.2
1,464,329	+		HSERO_RS06480	0.26	+1.6
1,464,614	-		HSERO_RS06480	0.43	+0.2
1,464,850	+		HSERO_RS06480	0.56	+1.0
1,464,934	-		HSERO_RS06480	0.61	-3.3
1,465,033	+		HSERO_RS06480	0.67	+0.6
1,465,074	+		HSERO_RS06480	0.69	-0.7
1,465,162	+		HSERO_RS06480	0.74	-0.2
1,465,390	-		HSERO_RS06480	0.87	-0.1
1,465,511	+				-1.1
1,465,554	-				-0.4
1,465,632	+				+0.4
1,465,693	+				-0.5
1,465,701	-				-0.9
1,465,741	+				-0.0
1,465,892	-				-0.6
1,465,928	+				-3.5
1,465,936	-				-0.8
1,465,936	-				-1.4
1,465,966	+				-0.4
1,465,975	-				+0.4
1,466,050	-				-0.1
1,466,102	+				+0.3
1,466,135	+				+4.3
1,466,140	+				-0.7
1,466,148	-				+0.1
1,466,180	+				-1.5
1,466,202	+				-0.3
1,466,207	+				-0.3
1,466,212	+				-0.8
1,466,276	+				-0.2
1,466,295	+				-0.4
1,466,357	+				+0.1
1,466,510	+		HSERO_RS06485	0.11	-0.4
1,466,556	-		HSERO_RS06485	0.11	+1.2