Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06470

Experiment: Fusidic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.025 mg/ml
1,459,140	+		HSERO_RS06460	0.42	-0.4
1,459,187	+		HSERO_RS06460	0.51	+0.1
1,459,322	+		HSERO_RS06460	0.78	-2.6
1,459,617	+		HSERO_RS06465	0.31	-0.3
1,459,648	+		HSERO_RS06465	0.36	-1.3
1,460,100	+				-0.0
1,460,952	-		HSERO_RS06470	0.49	-1.0
1,461,065	+		HSERO_RS06470	0.56	+0.1
1,461,073	-		HSERO_RS06470	0.56	-3.1
1,461,291	+		HSERO_RS06470	0.69	-0.6
1,461,360	+		HSERO_RS06470	0.73	-0.4
1,461,532	+		HSERO_RS06470	0.83	-0.8
1,461,665	-				+0.3
1,461,718	-				-3.3
1,461,755	+				+0.4
1,461,818	+				+0.2
1,461,826	-				-3.3
1,461,893	+				-0.2
1,461,968	-				-0.2
1,461,973	-				+0.5
1,462,039	+				+1.7
1,462,062	-				+0.4
1,462,070	+				+0.2
1,462,078	-				+0.3
1,462,091	+				+3.0
1,462,091	+				-0.0
1,462,092	+				-0.6
1,462,093	+				+0.3
1,462,093	-				+0.4
1,462,101	-				+0.0
1,462,101	-				+0.8
1,462,190	+				+1.7
1,462,190	+				+0.5
1,462,230	-				+0.7
1,462,230	-				-1.8
1,462,250	-				+0.4
1,462,254	+				+0.1
1,462,261	+				-0.0
1,462,261	+				-0.8
1,462,261	+				+1.6
1,462,262	-				+0.7
1,462,262	-				+0.8
1,462,269	-				+0.9
1,462,335	+				-0.2
1,462,335	+				+0.1
1,462,348	+				+0.5
1,462,348	+				+0.8
1,462,348	+				+0.1
1,462,348	-				-0.7
1,462,366	-				+0.1
1,462,378	-				-0.6
1,462,383	-				-0.2
1,462,412	-				+1.0
1,462,442	+				-0.0
1,462,447	+				-0.1
1,462,456	+				-1.6
1,462,507	+				+0.1
1,462,643	+				+0.9
1,462,643	+				-0.0
1,462,643	+				-0.5
1,462,643	+				+0.5
1,462,643	+				+1.9
1,462,643	+				-0.2
1,462,643	+				-0.3
1,462,643	+				+1.8
1,462,643	+				+0.2
1,462,643	+				+0.6
1,462,647	-				-0.5
1,462,651	-				-1.0
1,462,651	-				+0.6
1,462,651	-				-0.0
1,462,651	-				+0.3
1,462,651	-				-0.5
1,462,651	-				-1.8
1,462,651	-				+0.7
1,462,651	-				+1.3
1,462,667	+				+0.7
1,462,667	-				-0.2
1,462,736	+				+1.3
1,462,796	+		HSERO_RS06475	0.13	-0.1
1,462,804	-		HSERO_RS06475	0.14	-0.0