Experiment: Fusidic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03080 and HSERO_RS03085 are separated by 95 nucleotides HSERO_RS03085 and HSERO_RS03090 are separated by 7 nucleotides
HSERO_RS03080: HSERO_RS03080 - molecular chaperone DnaJ, at 674,563 to 675,690
_RS03080
HSERO_RS03085: HSERO_RS03085 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 675,786 to 676,613
_RS03085
HSERO_RS03090: HSERO_RS03090 - deoxyadenosine kinase, at 676,621 to 677,262
_RS03090
Position (kb) 676
677
678 Strain fitness (log2 ratio) -2
-1
0
1
2 at 675.892 kb on + strand, within HSERO_RS03085 at 676.100 kb on + strand, within HSERO_RS03085 at 676.132 kb on - strand, within HSERO_RS03085 at 676.382 kb on - strand, within HSERO_RS03085 at 676.495 kb on - strand, within HSERO_RS03085 at 676.561 kb on - strand at 676.561 kb on - strand at 676.561 kb on - strand at 676.654 kb on + strand at 676.679 kb on + strand at 676.818 kb on + strand, within HSERO_RS03090 at 676.929 kb on + strand, within HSERO_RS03090 at 676.929 kb on + strand, within HSERO_RS03090 at 677.120 kb on + strand, within HSERO_RS03090 at 677.171 kb on + strand, within HSERO_RS03090 at 677.179 kb on - strand, within HSERO_RS03090 at 677.241 kb on + strand at 677.264 kb on - strand at 677.266 kb on - strand at 677.330 kb on + strand at 677.338 kb on - strand at 677.396 kb on + strand at 677.396 kb on + strand at 677.396 kb on + strand at 677.404 kb on - strand at 677.455 kb on + strand at 677.516 kb on + strand at 677.539 kb on + strand at 677.605 kb on - strand at 677.625 kb on - strand at 678.190 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.025 mg/ml remove 675,892 + HSERO_RS03085 0.13 +0.3 676,100 + HSERO_RS03085 0.38 +1.9 676,132 - HSERO_RS03085 0.42 +0.2 676,382 - HSERO_RS03085 0.72 -0.2 676,495 - HSERO_RS03085 0.86 +0.8 676,561 - -1.2 676,561 - -1.3 676,561 - +1.0 676,654 + +0.4 676,679 + +1.0 676,818 + HSERO_RS03090 0.31 +0.9 676,929 + HSERO_RS03090 0.48 +0.4 676,929 + HSERO_RS03090 0.48 +0.6 677,120 + HSERO_RS03090 0.78 +1.1 677,171 + HSERO_RS03090 0.86 -0.4 677,179 - HSERO_RS03090 0.87 -0.4 677,241 + +0.2 677,264 - -0.0 677,266 - -2.6 677,330 + -0.2 677,338 - +0.1 677,396 + +0.3 677,396 + +0.4 677,396 + +0.1 677,404 - +0.5 677,455 + +0.6 677,516 + +1.8 677,539 + +0.1 677,605 - +0.3 677,625 - +0.1 678,190 + +0.4
Or see this region's nucleotide sequence