Experiment: Fusidic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02070 and HSERO_RS02075 overlap by 11 nucleotides HSERO_RS02075 and HSERO_RS02080 are separated by 70 nucleotides HSERO_RS02080 and HSERO_RS02085 overlap by 4 nucleotides
HSERO_RS02070: HSERO_RS02070 - deoxyribodipyrimidine photolyase, at 452,261 to 453,463
_RS02070
HSERO_RS02075: HSERO_RS02075 - hypothetical protein, at 453,453 to 453,866
_RS02075
HSERO_RS02080: HSERO_RS02080 - Holliday junction resolvase, at 453,937 to 454,479
_RS02080
HSERO_RS02085: HSERO_RS02085 - membrane protein, at 454,476 to 455,417
_RS02085
Position (kb) 453
454
455 Strain fitness (log2 ratio) -2
-1
0
1
2 at 452.973 kb on + strand, within HSERO_RS02070 at 453.009 kb on + strand, within HSERO_RS02070 at 453.251 kb on + strand, within HSERO_RS02070 at 453.328 kb on - strand, within HSERO_RS02070 at 453.366 kb on - strand at 453.443 kb on + strand at 453.606 kb on + strand, within HSERO_RS02075 at 453.702 kb on + strand, within HSERO_RS02075 at 453.755 kb on + strand, within HSERO_RS02075 at 453.814 kb on + strand, within HSERO_RS02075 at 453.875 kb on - strand at 454.001 kb on + strand, within HSERO_RS02080 at 454.373 kb on - strand, within HSERO_RS02080 at 454.879 kb on - strand, within HSERO_RS02085 at 454.949 kb on + strand, within HSERO_RS02085 at 454.957 kb on + strand, within HSERO_RS02085 at 454.965 kb on - strand, within HSERO_RS02085 at 455.086 kb on + strand, within HSERO_RS02085 at 455.131 kb on + strand, within HSERO_RS02085 at 455.209 kb on + strand, within HSERO_RS02085 at 455.209 kb on + strand, within HSERO_RS02085 at 455.227 kb on + strand, within HSERO_RS02085 at 455.239 kb on + strand, within HSERO_RS02085 at 455.275 kb on + strand, within HSERO_RS02085 at 455.456 kb on - strand at 455.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.025 mg/ml remove 452,973 + HSERO_RS02070 0.59 +0.7 453,009 + HSERO_RS02070 0.62 +2.2 453,251 + HSERO_RS02070 0.82 +1.2 453,328 - HSERO_RS02070 0.89 +1.3 453,366 - +0.3 453,443 + -0.3 453,606 + HSERO_RS02075 0.37 -0.0 453,702 + HSERO_RS02075 0.60 -0.3 453,755 + HSERO_RS02075 0.73 +0.6 453,814 + HSERO_RS02075 0.87 +0.1 453,875 - -0.9 454,001 + HSERO_RS02080 0.12 -2.3 454,373 - HSERO_RS02080 0.80 -1.9 454,879 - HSERO_RS02085 0.43 -0.5 454,949 + HSERO_RS02085 0.50 +0.2 454,957 + HSERO_RS02085 0.51 +0.4 454,965 - HSERO_RS02085 0.52 +0.1 455,086 + HSERO_RS02085 0.65 -0.0 455,131 + HSERO_RS02085 0.70 +0.4 455,209 + HSERO_RS02085 0.78 -1.2 455,209 + HSERO_RS02085 0.78 +0.2 455,227 + HSERO_RS02085 0.80 -0.2 455,239 + HSERO_RS02085 0.81 -0.7 455,275 + HSERO_RS02085 0.85 -2.1 455,456 - +0.6 455,473 + -0.1
Or see this region's nucleotide sequence