Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS18740 and CA265_RS18745 are separated by 150 nucleotides CA265_RS18745 and CA265_RS18750 are separated by 158 nucleotides CA265_RS18750 and CA265_RS18755 are separated by 21 nucleotides
CA265_RS18740: CA265_RS18740 - pyruvate kinase, at 4,666,010 to 4,667,440
_RS18740
CA265_RS18745: CA265_RS18745 - hypothetical protein, at 4,667,591 to 4,668,010
_RS18745
CA265_RS18750: CA265_RS18750 - acyl carrier protein, at 4,668,169 to 4,668,405
_RS18750
CA265_RS18755: CA265_RS18755 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 4,668,427 to 4,669,680
_RS18755
Position (kb)
4667
4668
4669 Strain fitness (log2 ratio)
-2
-1
0
1 at 4667.480 kb on - strand at 4667.585 kb on + strand at 4667.786 kb on + strand, within CA265_RS18745 at 4667.790 kb on + strand, within CA265_RS18745 at 4667.934 kb on + strand, within CA265_RS18745 at 4668.055 kb on - strand at 4668.651 kb on - strand, within CA265_RS18755 at 4668.651 kb on - strand, within CA265_RS18755 at 4668.734 kb on + strand, within CA265_RS18755 at 4668.880 kb on + strand, within CA265_RS18755 at 4668.954 kb on + strand, within CA265_RS18755
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 4,667,480 - +0.1 4,667,585 + -1.0 4,667,786 + CA265_RS18745 0.46 -1.0 4,667,790 + CA265_RS18745 0.47 -0.8 4,667,934 + CA265_RS18745 0.82 -0.2 4,668,055 - +1.2 4,668,651 - CA265_RS18755 0.18 -2.0 4,668,651 - CA265_RS18755 0.18 -0.7 4,668,734 + CA265_RS18755 0.24 +0.3 4,668,880 + CA265_RS18755 0.36 +0.8 4,668,954 + CA265_RS18755 0.42 +1.1
Or see this region's nucleotide sequence