Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21305 and AO356_21310 overlap by 4 nucleotides AO356_21310 and AO356_21315 are separated by 89 nucleotides AO356_21315 and AO356_21320 are separated by 247 nucleotides AO356_21320 and AO356_21325 are separated by 235 nucleotides AO356_21325 and AO356_21330 are separated by 110 nucleotides
AO356_21305: AO356_21305 - hypothetical protein, at 4,781,105 to 4,782,166
_21305
AO356_21310: AO356_21310 - filamentous hemagglutinin, at 4,782,163 to 4,782,345
_21310
AO356_21315: AO356_21315 - hypothetical protein, at 4,782,435 to 4,782,629
_21315
AO356_21320: AO356_21320 - tRNA-Asn, at 4,782,877 to 4,782,952
_21320
AO356_21325: AO356_21325 - hypothetical protein, at 4,783,188 to 4,783,415
_21325
AO356_21330: AO356_21330 - aromatic amino acid aminotransferase, at 4,783,526 to 4,784,722
_21330
Position (kb) 4782
4783 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4781.900 kb on + strand, within AO356_21305 at 4781.901 kb on - strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.179 kb on + strand at 4782.263 kb on + strand, within AO356_21310 at 4782.263 kb on + strand, within AO356_21310 at 4782.372 kb on + strand at 4782.416 kb on + strand at 4782.416 kb on + strand at 4782.416 kb on + strand at 4782.417 kb on - strand at 4782.417 kb on - strand at 4782.417 kb on - strand at 4782.567 kb on + strand, within AO356_21315 at 4782.567 kb on + strand, within AO356_21315 at 4782.567 kb on + strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.574 kb on + strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.629 kb on + strand at 4782.629 kb on + strand at 4782.629 kb on + strand at 4782.630 kb on - strand at 4782.630 kb on - strand at 4782.630 kb on - strand at 4782.747 kb on - strand at 4782.747 kb on - strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.801 kb on - strand at 4782.933 kb on - strand, within AO356_21320 at 4783.130 kb on + strand at 4783.130 kb on + strand at 4783.131 kb on - strand at 4783.131 kb on - strand at 4783.245 kb on + strand, within AO356_21325 at 4783.245 kb on + strand, within AO356_21325 at 4783.332 kb on - strand, within AO356_21325 at 4783.332 kb on - strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.378 kb on - strand, within AO356_21325 at 4783.378 kb on - strand, within AO356_21325 at 4783.413 kb on + strand at 4783.413 kb on + strand at 4783.413 kb on + strand at 4783.414 kb on - strand at 4783.414 kb on - strand at 4783.543 kb on + strand at 4783.544 kb on - strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.668 kb on + strand, within AO356_21330 at 4783.669 kb on - strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 4,781,900 + AO356_21305 0.75 -0.2 4,781,901 - AO356_21305 0.75 +0.2 4,782,026 + AO356_21305 0.87 +0.4 4,782,026 + AO356_21305 0.87 -0.4 4,782,026 + AO356_21305 0.87 +0.3 4,782,026 + AO356_21305 0.87 -0.2 4,782,026 + AO356_21305 0.87 +0.2 4,782,026 + AO356_21305 0.87 +0.4 4,782,026 + AO356_21305 0.87 +0.6 4,782,026 + AO356_21305 0.87 -0.6 4,782,026 + AO356_21305 0.87 +0.9 4,782,026 + AO356_21305 0.87 -1.1 4,782,027 - AO356_21305 0.87 -0.4 4,782,027 - AO356_21305 0.87 -0.3 4,782,027 - AO356_21305 0.87 +0.1 4,782,179 + +0.1 4,782,263 + AO356_21310 0.55 +0.2 4,782,263 + AO356_21310 0.55 -1.1 4,782,372 + +0.1 4,782,416 + +0.1 4,782,416 + -0.2 4,782,416 + -0.2 4,782,417 - -1.4 4,782,417 - +0.4 4,782,417 - +0.6 4,782,567 + AO356_21315 0.68 +0.3 4,782,567 + AO356_21315 0.68 +0.4 4,782,567 + AO356_21315 0.68 +0.5 4,782,568 - AO356_21315 0.68 +0.0 4,782,568 - AO356_21315 0.68 -0.9 4,782,568 - AO356_21315 0.68 +0.6 4,782,568 - AO356_21315 0.68 -1.4 4,782,568 - AO356_21315 0.68 -0.4 4,782,574 + AO356_21315 0.71 -0.4 4,782,575 - AO356_21315 0.72 -0.2 4,782,575 - AO356_21315 0.72 +0.0 4,782,575 - AO356_21315 0.72 +0.4 4,782,629 + +0.1 4,782,629 + -0.4 4,782,629 + +1.9 4,782,630 - -0.3 4,782,630 - -0.2 4,782,630 - +1.1 4,782,747 - -0.2 4,782,747 - -0.7 4,782,798 + -1.5 4,782,798 + -0.9 4,782,798 + +1.5 4,782,798 + -1.5 4,782,798 + +0.2 4,782,798 + -0.4 4,782,798 + +0.4 4,782,798 + +0.1 4,782,798 + +0.1 4,782,798 + +0.6 4,782,798 + +0.2 4,782,798 + -0.7 4,782,798 + +0.4 4,782,798 + +0.4 4,782,798 + +0.1 4,782,799 - -0.4 4,782,799 - -0.2 4,782,799 - +1.3 4,782,799 - -1.2 4,782,799 - -0.1 4,782,799 - -0.5 4,782,799 - -0.8 4,782,799 - +0.1 4,782,799 - -0.4 4,782,799 - -0.0 4,782,799 - -1.2 4,782,799 - +0.4 4,782,799 - -0.6 4,782,799 - -0.4 4,782,799 - -1.4 4,782,799 - -2.1 4,782,799 - -0.1 4,782,799 - -0.5 4,782,800 + -0.1 4,782,800 + -0.4 4,782,800 + +0.6 4,782,800 + -0.3 4,782,801 - -0.4 4,782,933 - AO356_21320 0.74 +0.1 4,783,130 + +0.8 4,783,130 + -0.5 4,783,131 - -0.1 4,783,131 - -1.2 4,783,245 + AO356_21325 0.25 -0.0 4,783,245 + AO356_21325 0.25 -1.0 4,783,332 - AO356_21325 0.63 +0.7 4,783,332 - AO356_21325 0.63 -0.3 4,783,368 + AO356_21325 0.79 +0.5 4,783,368 + AO356_21325 0.79 +0.7 4,783,368 + AO356_21325 0.79 -0.1 4,783,368 + AO356_21325 0.79 -0.9 4,783,368 + AO356_21325 0.79 -1.1 4,783,368 + AO356_21325 0.79 +1.4 4,783,368 + AO356_21325 0.79 -0.4 4,783,368 + AO356_21325 0.79 +0.5 4,783,368 + AO356_21325 0.79 +0.0 4,783,368 + AO356_21325 0.79 -0.7 4,783,369 - AO356_21325 0.79 +0.8 4,783,369 - AO356_21325 0.79 -1.5 4,783,369 - AO356_21325 0.79 -0.6 4,783,369 - AO356_21325 0.79 +0.6 4,783,369 - AO356_21325 0.79 +0.7 4,783,369 - AO356_21325 0.79 -0.8 4,783,369 - AO356_21325 0.79 +0.4 4,783,369 - AO356_21325 0.79 +0.6 4,783,369 - AO356_21325 0.79 +0.9 4,783,369 - AO356_21325 0.79 -0.2 4,783,369 - AO356_21325 0.79 -0.6 4,783,369 - AO356_21325 0.79 -0.1 4,783,369 - AO356_21325 0.79 -0.2 4,783,377 + AO356_21325 0.83 -0.2 4,783,377 + AO356_21325 0.83 -0.8 4,783,377 + AO356_21325 0.83 -0.4 4,783,378 - AO356_21325 0.83 -0.4 4,783,378 - AO356_21325 0.83 -0.7 4,783,413 + -0.4 4,783,413 + +0.4 4,783,413 + -0.8 4,783,414 - +0.9 4,783,414 - +0.1 4,783,543 + -1.3 4,783,544 - +0.9 4,783,614 + -1.9 4,783,614 + -0.9 4,783,614 + -0.5 4,783,614 + -0.6 4,783,614 + -1.1 4,783,615 - -1.9 4,783,615 - -0.0 4,783,615 - -2.5 4,783,615 - -0.6 4,783,615 - -0.2 4,783,668 + AO356_21330 0.12 -1.2 4,783,669 - AO356_21330 0.12 +0.2 4,783,869 + AO356_21330 0.29 -0.8 4,783,869 + AO356_21330 0.29 -0.1 4,783,869 + AO356_21330 0.29 -2.3
Or see this region's nucleotide sequence