Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4282

Experiment: apoplastic, sonication recovery; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic, sonication recovery; Green bean
5,104,638	+				-0.2
5,104,638	+				-2.7
5,104,638	+				-3.2
5,104,638	+				-1.0
5,104,638	+				-1.5
5,104,638	+				-0.5
5,104,638	+				-1.5
5,104,638	+				+1.8
5,104,639	-				+0.8
5,104,639	-				-1.9
5,104,639	-				-1.1
5,104,639	-				+0.4
5,104,639	-				+1.5
5,104,639	-				+2.3
5,104,639	-				-1.4
5,104,639	-				-1.2
5,104,641	+				-0.5
5,104,641	+				-2.0
5,104,641	+				-2.8
5,104,641	+				+1.5
5,104,641	+				+0.8
5,104,641	+				-0.6
5,104,642	-				-0.8
5,104,642	-				-1.5
5,104,642	-				-0.4
5,104,820	+		Psyr_4281	0.22	+1.5
5,104,820	+		Psyr_4281	0.22	-0.9
5,104,869	+		Psyr_4281	0.27	-0.8
5,104,869	+		Psyr_4281	0.27	-1.2
5,104,869	+		Psyr_4281	0.27	-0.3
5,104,869	+		Psyr_4281	0.27	+1.9
5,104,869	+		Psyr_4281	0.27	+0.2
5,104,869	+		Psyr_4281	0.27	+1.8
5,104,869	+		Psyr_4281	0.27	+1.2
5,104,869	+		Psyr_4281	0.27	-0.5
5,104,869	+		Psyr_4281	0.27	+1.8
5,104,869	+		Psyr_4281	0.27	+0.8
5,104,869	+		Psyr_4281	0.27	+1.7
5,104,869	+		Psyr_4281	0.27	-2.5
5,104,869	+		Psyr_4281	0.27	+0.8
5,104,869	+		Psyr_4281	0.27	-0.9
5,104,869	+		Psyr_4281	0.27	-2.0
5,104,869	+		Psyr_4281	0.27	+1.1
5,104,870	-		Psyr_4281	0.27	+1.8
5,104,870	-		Psyr_4281	0.27	+0.8
5,104,870	-		Psyr_4281	0.27	+1.1
5,104,870	-		Psyr_4281	0.27	+3.8
5,104,870	-		Psyr_4281	0.27	-0.5
5,104,870	-		Psyr_4281	0.27	-1.5
5,104,870	-		Psyr_4281	0.27	+1.1
5,104,870	-		Psyr_4281	0.27	-1.2
5,104,870	-		Psyr_4281	0.27	+1.6
5,104,870	-		Psyr_4281	0.27	+1.5
5,104,870	-		Psyr_4281	0.27	+0.8
5,104,870	-		Psyr_4281	0.27	+0.9
5,104,870	-		Psyr_4281	0.27	+3.2
5,104,870	-		Psyr_4281	0.27	-0.2
5,104,870	-		Psyr_4281	0.27	-1.1
5,104,870	-		Psyr_4281	0.27	+1.1
5,104,870	-		Psyr_4281	0.27	-0.1
5,104,870	-		Psyr_4281	0.27	-1.0
5,104,870	-		Psyr_4281	0.27	-0.4
5,104,870	-		Psyr_4281	0.27	+0.3
5,104,870	-		Psyr_4281	0.27	-1.7
5,104,870	-		Psyr_4281	0.27	+0.8
5,104,870	-		Psyr_4281	0.27	+1.5
5,104,870	-		Psyr_4281	0.27	-1.7
5,104,870	-		Psyr_4281	0.27	-0.1
5,104,870	-		Psyr_4281	0.27	-1.6
5,104,870	-		Psyr_4281	0.27	+2.7
5,105,193	+		Psyr_4281	0.59	-0.6
5,105,193	+		Psyr_4281	0.59	+1.8
5,105,193	+		Psyr_4281	0.59	-1.9
5,105,193	+		Psyr_4281	0.59	+1.2
5,105,193	+		Psyr_4281	0.59	+2.0
5,105,193	+		Psyr_4281	0.59	+1.6
5,105,193	+		Psyr_4281	0.59	+3.7
5,105,193	+		Psyr_4281	0.59	+1.7
5,105,193	+		Psyr_4281	0.59	-1.1
5,105,193	+		Psyr_4281	0.59	+2.1
5,105,193	+		Psyr_4281	0.59	+0.3
5,105,193	+		Psyr_4281	0.59	+0.2
5,105,193	+		Psyr_4281	0.59	+0.7
5,105,194	-		Psyr_4281	0.59	-2.6
5,105,194	-		Psyr_4281	0.59	-1.9
5,105,194	-		Psyr_4281	0.59	+0.0
5,105,194	-		Psyr_4281	0.59	-3.0
5,105,194	-		Psyr_4281	0.59	-1.4
5,105,194	-		Psyr_4281	0.59	+5.3
5,105,194	-		Psyr_4281	0.59	-2.2
5,105,194	-		Psyr_4281	0.59	+1.2
5,105,194	-		Psyr_4281	0.59	+1.2
5,105,194	-		Psyr_4281	0.59	-0.1
5,105,194	-		Psyr_4281	0.59	+0.9
5,105,352	+		Psyr_4281	0.75	-1.0
5,105,377	-		Psyr_4281	0.78	+0.4
5,105,544	+				-0.6
5,105,544	+				-1.4
5,105,544	+				-0.9
5,105,544	+				-1.4
5,105,544	+				-0.4
5,105,544	+				+0.1
5,105,544	+				-3.3
5,105,544	+				+3.5
5,105,544	+				-1.4
5,105,545	-				-2.6
5,105,545	-				+1.2
5,105,545	-				-1.0
5,105,545	-				+1.5
5,105,545	-				+2.0
5,105,545	-				-0.3
5,105,545	-				+6.1
5,105,545	-				+1.9
5,105,545	-				-0.8
5,105,545	-				+2.3
5,105,545	-				+0.5
5,105,545	-				-2.0
5,105,545	-				+1.3
5,105,545	-				-0.4
5,105,607	+				+2.7
5,105,607	+				-0.6
5,105,607	+				+1.4
5,105,608	-				+0.7
5,105,728	-				+1.6
5,105,728	-				+0.2
5,105,728	-				+0.3
5,105,728	-				-2.2
5,105,763	+		Psyr_4282	0.11	+1.8
5,105,763	+		Psyr_4282	0.11	+2.9
5,105,763	+		Psyr_4282	0.11	-1.3
5,105,763	+		Psyr_4282	0.11	+1.8
5,105,763	+		Psyr_4282	0.11	-1.4
5,105,764	-		Psyr_4282	0.11	-2.5
5,105,764	-		Psyr_4282	0.11	+2.6
5,105,764	-		Psyr_4282	0.11	-0.4
5,105,794	-		Psyr_4282	0.13	+1.1
5,105,877	+		Psyr_4282	0.19	-1.2
5,105,967	+		Psyr_4282	0.25	-0.6
5,105,968	-		Psyr_4282	0.25	+2.8
5,105,989	-		Psyr_4282	0.27	-1.0
5,106,094	+		Psyr_4282	0.34	+3.1
5,106,095	-		Psyr_4282	0.34	-0.4
5,106,192	+		Psyr_4282	0.41	+1.7
5,106,193	-		Psyr_4282	0.41	+1.1
5,106,193	-		Psyr_4282	0.41	+0.9
5,106,199	+		Psyr_4282	0.41	+0.2
5,106,200	-		Psyr_4282	0.41	+1.4
5,106,200	-		Psyr_4282	0.41	-0.0
5,106,747	+		Psyr_4282	0.79	+0.6
5,106,747	+		Psyr_4282	0.79	+1.5
5,106,748	-		Psyr_4282	0.79	-0.8
5,106,748	-		Psyr_4282	0.79	-1.7
5,106,748	-		Psyr_4282	0.79	+0.4
5,106,748	-		Psyr_4282	0.79	-1.8
5,106,885	+		Psyr_4282	0.89	+1.6
5,106,885	+		Psyr_4282	0.89	-1.7
5,106,886	-		Psyr_4282	0.89	-0.1
5,106,897	+		Psyr_4282	0.90	+2.4
5,106,945	+				+1.4
5,106,945	+				+4.0
5,106,946	-				-0.2
5,107,025	+				-0.8
5,107,025	+				+1.1
5,107,025	+				+0.5
5,107,025	+				+0.2
5,107,025	+				+2.3
5,107,025	+				+0.4
5,107,025	+				+0.2
5,107,025	+				+0.8
5,107,025	+				-2.0
5,107,025	+				+1.5
5,107,025	+				+1.1
5,107,025	+				-0.4
5,107,025	+				-0.1
5,107,025	+				-3.2
5,107,025	+				-2.0
5,107,025	+				+0.2
5,107,025	+				-2.6
5,107,025	+				-1.8
5,107,025	+				-0.8
5,107,025	+				-0.0
5,107,026	-				+2.6
5,107,026	-				+0.2
5,107,026	-				+2.1
5,107,026	-				+0.8
5,107,026	-				+0.7
5,107,026	-				-0.3
5,107,026	-				+0.2
5,107,026	-				+1.2
5,107,026	-				-0.3
5,107,026	-				+2.8
5,107,026	-				+2.2
5,107,026	-				+1.3
5,107,028	-				-0.8
5,107,045	+				-1.8
5,107,045	+				+1.8
5,107,045	+				+1.2
5,107,045	+				+0.4
5,107,045	+				-1.6
5,107,045	+				-1.4
5,107,045	+				+1.9
5,107,045	+				-2.3
5,107,045	+				-2.6
5,107,045	+				-1.8
5,107,045	+				-0.7
5,107,045	+				+1.6
5,107,045	+				-0.8
5,107,045	+				+1.6
5,107,045	+				-0.6
5,107,045	+				-1.1
5,107,045	+				+0.7
5,107,046	-				+0.3
5,107,046	-				-1.7
5,107,046	-				-0.1
5,107,046	-				-1.3
5,107,046	-				-0.6
5,107,046	-				+0.3
5,107,046	-				-1.9
5,107,046	-				-1.6
5,107,046	-				-1.0
5,107,046	-				+0.2
5,107,046	-				+0.2
5,107,046	-				+1.1
5,107,121	+				+0.0
5,107,121	+				-2.1
5,107,121	+				+2.1
5,107,121	+				-1.0
5,107,121	+				-1.7
5,107,121	+				-0.2
5,107,122	-				+1.7
5,107,122	-				+0.1
5,107,122	-				-1.2
5,107,122	-				+1.0
5,107,122	-				+1.1
5,107,122	-				+1.7
5,107,122	-				+1.2
5,107,131	+				+1.2
5,107,195	+				-1.0
5,107,196	-				-2.0
5,107,196	-				+0.4
5,107,196	-				+1.4
5,107,237	+				-1.2
5,107,252	+				+2.2
5,107,298	+				-0.2
5,107,378	+				+3.2
5,107,531	+				+1.0
5,107,558	+				-1.6
5,107,578	+				+1.2
5,107,578	+				-1.8
5,107,578	+				-1.4
5,107,579	-				+1.8
5,107,579	-				-0.6
5,107,579	-				-1.3
5,107,579	-				+0.3
5,107,945	+		Psyr_4283	0.19	+1.7
5,107,945	+		Psyr_4283	0.19	+0.8
5,107,946	-		Psyr_4283	0.19	-0.6
5,107,956	+		Psyr_4283	0.20	+0.7