Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3141

Experiment: apoplastic, sonication recovery; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic, sonication recovery; Green bean
3,765,940	+				+3.2
3,765,940	+				+1.7
3,765,941	-				+0.2
3,765,941	-				-1.6
3,765,941	-				-1.3
3,765,941	-				-1.3
3,765,941	-				+3.1
3,765,941	-				-0.0
3,765,941	-				+0.8
3,765,941	-				+0.8
3,765,983	+				+1.5
3,765,983	+				-1.9
3,765,983	+				-2.9
3,765,983	+				+0.1
3,765,984	-				-0.7
3,765,984	-				+1.7
3,765,984	-				+1.4
3,765,984	-				-2.4
3,766,065	+		Psyr_3140	0.11	+1.5
3,766,066	-		Psyr_3140	0.11	-2.0
3,766,066	-		Psyr_3140	0.11	-2.4
3,766,066	-		Psyr_3140	0.11	+1.3
3,766,073	+		Psyr_3140	0.12	+2.8
3,766,073	+		Psyr_3140	0.12	-0.0
3,766,073	+		Psyr_3140	0.12	-2.6
3,766,073	+		Psyr_3140	0.12	+1.3
3,766,073	+		Psyr_3140	0.12	-2.5
3,766,073	+				+1.5
3,766,073	+		Psyr_3140	0.12	+1.1
3,766,073	+		Psyr_3140	0.12	-2.8
3,766,073	+		Psyr_3140	0.12	-0.3
3,766,073	+		Psyr_3140	0.12	+1.3
3,766,074	-		Psyr_3140	0.12	+1.5
3,766,074	-		Psyr_3140	0.12	-2.5
3,766,074	-		Psyr_3140	0.12	-0.9
3,766,074	-		Psyr_3140	0.12	-1.3
3,766,074	-		Psyr_3140	0.12	+0.5
3,766,074	-		Psyr_3140	0.12	-0.8
3,766,074	-		Psyr_3140	0.12	+1.4
3,766,074	-		Psyr_3140	0.12	+0.4
3,766,074	-		Psyr_3140	0.12	+1.5
3,766,074	-		Psyr_3140	0.12	+3.1
3,766,131	+		Psyr_3140	0.20	-0.3
3,766,131	+		Psyr_3140	0.20	-1.0
3,766,169	+		Psyr_3140	0.25	-0.1
3,766,170	-		Psyr_3140	0.25	-0.9
3,766,170	-		Psyr_3140	0.25	+0.5
3,766,287	+		Psyr_3140	0.42	+0.2
3,766,288	-		Psyr_3140	0.42	+1.0
3,766,288	-		Psyr_3140	0.42	+0.9
3,766,423	-		Psyr_3140	0.60	-1.1
3,766,458	+		Psyr_3140	0.65	+3.2
3,766,458	+		Psyr_3140	0.65	-0.0
3,766,458	+		Psyr_3140	0.65	-2.0
3,766,458	+		Psyr_3140	0.65	-1.8
3,766,459	-		Psyr_3140	0.65	-1.0
3,766,459	-		Psyr_3140	0.65	+0.5
3,766,459	-		Psyr_3140	0.65	-1.6
3,766,500	+		Psyr_3140	0.71	-2.0
3,766,500	+		Psyr_3140	0.71	-0.3
3,766,500	+		Psyr_3140	0.71	+1.1
3,766,500	+		Psyr_3140	0.71	-0.5
3,766,500	+		Psyr_3140	0.71	-0.6
3,766,500	+		Psyr_3140	0.71	+0.7
3,766,500	+		Psyr_3140	0.71	+1.3
3,766,500	+		Psyr_3140	0.71	+1.1
3,766,500	+		Psyr_3140	0.71	-0.3
3,766,500	+		Psyr_3140	0.71	+1.7
3,766,500	+		Psyr_3140	0.71	+0.5
3,766,500	+		Psyr_3140	0.71	-0.5
3,766,500	+		Psyr_3140	0.71	-1.5
3,766,501	-		Psyr_3140	0.71	-1.5
3,766,501	-		Psyr_3140	0.71	+1.4
3,766,501	-		Psyr_3140	0.71	-1.1
3,766,501	-		Psyr_3140	0.71	+0.7
3,766,501	-		Psyr_3140	0.71	-0.8
3,766,501	-		Psyr_3140	0.71	+1.5
3,766,501	-		Psyr_3140	0.71	+0.3
3,766,501	-		Psyr_3140	0.71	-0.8
3,766,501	-		Psyr_3140	0.71	+1.1
3,766,501	-		Psyr_3140	0.71	-0.7
3,766,501	-		Psyr_3140	0.71	+0.2
3,766,501	-		Psyr_3140	0.71	+0.0
3,766,501	-		Psyr_3140	0.71	+0.2
3,766,501	-		Psyr_3140	0.71	-0.0
3,766,501	-		Psyr_3140	0.71	+0.4
3,766,501	-		Psyr_3140	0.71	+0.0
3,766,501	-		Psyr_3140	0.71	+0.4
3,766,501	-		Psyr_3140	0.71	-3.1
3,766,501	-		Psyr_3140	0.71	+1.7
3,766,501	-		Psyr_3140	0.71	+2.1
3,766,506	+		Psyr_3140	0.72	+0.7
3,766,506	+		Psyr_3140	0.72	-3.0
3,766,507	-		Psyr_3140	0.72	-1.0
3,766,685	+				+1.6
3,766,686	-				-1.2
3,766,936	-				-0.3
3,766,976	+				-1.9
3,767,085	+		Psyr_3141	0.13	-2.0
3,767,154	+		Psyr_3141	0.16	+0.1
3,767,154	+		Psyr_3141	0.16	-0.2
3,767,155	-		Psyr_3141	0.16	-1.5
3,767,155	-		Psyr_3141	0.16	+0.5
3,767,155	-		Psyr_3141	0.16	-1.0
3,767,155	-		Psyr_3141	0.16	+0.2
3,767,156	+		Psyr_3141	0.16	-0.5
3,767,156	+		Psyr_3141	0.16	-0.5
3,767,156	+		Psyr_3141	0.16	+0.2
3,767,156	+		Psyr_3141	0.16	+1.0
3,767,156	+		Psyr_3141	0.16	-0.7
3,767,156	+		Psyr_3141	0.16	+1.3
3,767,156	+		Psyr_3141	0.16	+0.5
3,767,156	+		Psyr_3141	0.16	-1.0
3,767,156	+		Psyr_3141	0.16	-1.5
3,767,156	+		Psyr_3141	0.16	-0.9
3,767,156	+		Psyr_3141	0.16	-0.3
3,767,156	+		Psyr_3141	0.16	+0.4
3,767,156	+		Psyr_3141	0.16	-0.1
3,767,156	+		Psyr_3141	0.16	-0.6
3,767,156	+		Psyr_3141	0.16	+1.8
3,767,157	-		Psyr_3141	0.16	-1.0
3,767,157	-		Psyr_3141	0.16	-2.0
3,767,157	-		Psyr_3141	0.16	+1.2
3,767,157	-		Psyr_3141	0.16	-1.9
3,767,157	-		Psyr_3141	0.16	+2.9
3,767,157	-		Psyr_3141	0.16	+1.0
3,767,157	-		Psyr_3141	0.16	-0.0
3,767,157	-		Psyr_3141	0.16	-2.3
3,767,157	-		Psyr_3141	0.16	-0.9
3,767,216	+		Psyr_3141	0.19	+2.8
3,767,216	+		Psyr_3141	0.19	-2.2
3,767,217	-		Psyr_3141	0.19	-1.6
3,767,217	-		Psyr_3141	0.19	-0.9
3,767,217	-		Psyr_3141	0.19	-1.2
3,767,414	+		Psyr_3141	0.27	-0.5
3,767,414	+		Psyr_3141	0.27	+0.4
3,767,414	+		Psyr_3141	0.27	-1.6
3,767,414	+		Psyr_3141	0.27	-0.8
3,767,415	-		Psyr_3141	0.27	-1.8
3,767,728	-		Psyr_3141	0.41	+2.0
3,767,728	-		Psyr_3141	0.41	-2.5
3,768,023	+		Psyr_3141	0.53	-1.8
3,768,023	+		Psyr_3141	0.53	+0.8
3,768,039	-		Psyr_3141	0.54	-1.3
3,768,039	-		Psyr_3141	0.54	-0.3
3,768,039	-		Psyr_3141	0.54	-0.9
3,768,039	-				-0.0
3,768,077	+		Psyr_3141	0.56	-2.5
3,768,077	+		Psyr_3141	0.56	+0.7
3,768,077	+		Psyr_3141	0.56	-1.5
3,768,078	-		Psyr_3141	0.56	+1.3
3,768,078	-		Psyr_3141	0.56	-0.8
3,768,078	-		Psyr_3141	0.56	+0.9
3,768,078	-		Psyr_3141	0.56	-1.5
3,768,078	-		Psyr_3141	0.56	+0.5
3,768,083	+		Psyr_3141	0.56	+2.0
3,768,083	+		Psyr_3141	0.56	-2.2
3,768,083	+		Psyr_3141	0.56	-1.3
3,768,083	+		Psyr_3141	0.56	-0.5
3,768,083	+		Psyr_3141	0.56	-2.4
3,768,083	+		Psyr_3141	0.56	-0.0
3,768,083	+		Psyr_3141	0.56	-3.3
3,768,083	+		Psyr_3141	0.56	-2.0
3,768,083	+		Psyr_3141	0.56	-0.1
3,768,083	+		Psyr_3141	0.56	+0.5
3,768,083	+		Psyr_3141	0.56	-0.0
3,768,083	+		Psyr_3141	0.56	+1.5
3,768,083	+		Psyr_3141	0.56	-0.8
3,768,083	+		Psyr_3141	0.56	-0.6
3,768,083	+		Psyr_3141	0.56	+0.7
3,768,083	+		Psyr_3141	0.56	+1.7
3,768,083	+		Psyr_3141	0.56	+1.8
3,768,083	+		Psyr_3141	0.56	-1.5
3,768,083	+		Psyr_3141	0.56	-1.3
3,768,083	+		Psyr_3141	0.56	+0.3
3,768,083	+		Psyr_3141	0.56	-0.7
3,768,083	+		Psyr_3141	0.56	-2.6
3,768,084	-		Psyr_3141	0.56	+2.0
3,768,084	-		Psyr_3141	0.56	+1.5
3,768,084	-		Psyr_3141	0.56	+1.9
3,768,084	-		Psyr_3141	0.56	-0.7
3,768,084	-		Psyr_3141	0.56	-0.6
3,768,084	-		Psyr_3141	0.56	-0.0
3,768,084	-		Psyr_3141	0.56	+2.5
3,768,084	-		Psyr_3141	0.56	+0.6
3,768,084	-		Psyr_3141	0.56	-1.5
3,768,084	-		Psyr_3141	0.56	-2.3
3,768,084	-		Psyr_3141	0.56	-0.6
3,768,084	-		Psyr_3141	0.56	-1.3
3,768,084	-		Psyr_3141	0.56	-2.8
3,768,084	-		Psyr_3141	0.56	-0.5
3,768,084	-		Psyr_3141	0.56	-0.9
3,768,084	-		Psyr_3141	0.56	-0.2
3,768,084	-		Psyr_3141	0.56	+0.4
3,768,084	-		Psyr_3141	0.56	-2.0
3,768,084	-		Psyr_3141	0.56	-0.0
3,768,084	-		Psyr_3141	0.56	+1.2
3,768,084	-		Psyr_3141	0.56	-2.8
3,768,084	-		Psyr_3141	0.56	-2.2
3,768,084	-		Psyr_3141	0.56	+1.9
3,768,084	-		Psyr_3141	0.56	-3.1
3,768,084	-		Psyr_3141	0.56	-2.1
3,768,084	-		Psyr_3141	0.56	+0.5
3,768,084	-		Psyr_3141	0.56	-1.4
3,768,084	-		Psyr_3141	0.56	+0.2
3,768,084	-		Psyr_3141	0.56	-3.3
3,768,084	-		Psyr_3141	0.56	+1.0
3,768,084	-		Psyr_3141	0.56	+2.5
3,768,084	-		Psyr_3141	0.56	-1.8
3,768,150	-		Psyr_3141	0.59	-1.8
3,768,150	-		Psyr_3141	0.59	-1.8
3,768,359	+		Psyr_3141	0.68	-1.3
3,768,359	+		Psyr_3141	0.68	-2.3
3,768,360	-		Psyr_3141	0.68	-3.2
3,768,360	-		Psyr_3141	0.68	-0.6
3,768,360	-		Psyr_3141	0.68	-1.5
3,768,482	+		Psyr_3141	0.73	-0.8
3,768,483	-		Psyr_3141	0.73	-0.8
3,768,483	-		Psyr_3141	0.73	-0.8
3,768,722	+		Psyr_3141	0.83	-0.0
3,768,722	+		Psyr_3141	0.83	-2.2
3,768,722	+		Psyr_3141	0.83	+0.7
3,768,723	-		Psyr_3141	0.83	-1.3
3,768,723	-		Psyr_3141	0.83	-1.5
3,768,723	-		Psyr_3141	0.83	-0.0
3,768,723	-		Psyr_3141	0.83	-0.5
3,769,081	-				-1.7
3,769,220	+		Psyr_3142	0.20	+0.1
3,769,220	+		Psyr_3142	0.20	+1.3
3,769,220	+		Psyr_3142	0.20	+1.9
3,769,221	-		Psyr_3142	0.20	-0.3
3,769,449	-		Psyr_3142	0.63	-1.0
3,769,629	+				-1.0
3,769,629	+				+1.0
3,769,629	+				-2.3
3,769,630	-				+0.3
3,769,630	-				-1.0
3,769,630	-				-3.1
3,769,630	-				+0.3
3,769,750	+		Psyr_3143	0.18	+1.0
3,769,750	+		Psyr_3143	0.18	-3.0
3,769,750	+		Psyr_3143	0.18	-1.5
3,769,750	+		Psyr_3143	0.18	-0.5
3,769,751	-		Psyr_3143	0.18	-0.8