Strain Fitness in Pantoea sp. MT58 around IAI47_10935

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, aerobic
2,308,544	+				-1.1
2,308,545	-				-0.6
2,308,566	-				-1.5
2,308,605	-				+0.1
2,308,605	-				-0.8
2,308,625	+				-0.6
2,308,626	-				-0.8
2,308,627	+				+0.2
2,308,627	+				+2.2
2,308,628	-				-1.6
2,308,628	-				+0.3
2,308,628	-				+1.1
2,308,628	-				-0.8
2,308,631	-				+1.7
2,308,650	+				-0.9
2,308,721	-				+0.7
2,308,721	-				-1.0
2,308,753	+				-0.2
2,308,783	+				+0.4
2,308,783	+				-0.3
2,308,787	-				+0.2
2,308,787	-				+0.6
2,308,787	-				-2.1
2,308,802	+				+0.4
2,308,802	+				+0.8
2,308,813	+				+1.6
2,308,813	+				-1.5
2,308,818	+				+1.0
2,308,827	+				+1.3
2,308,827	+				+0.7
2,308,828	-				+0.3
2,308,849	+				+0.4
2,308,861	+				+1.9
2,308,861	+				+0.2
2,308,861	+				-0.2
2,308,890	+				-0.3
2,308,891	-				-1.0
2,308,922	+				-0.0
2,308,922	+				+0.8
2,308,948	+		IAI47_10930	0.14	-0.5
2,308,948	+		IAI47_10930	0.14	-1.8
2,308,949	-		IAI47_10930	0.14	-1.3
2,308,949	-		IAI47_10930	0.14	+0.7
2,308,994	+		IAI47_10930	0.24	-0.8
2,308,994	+		IAI47_10930	0.24	+2.2
2,308,994	+		IAI47_10930	0.24	-0.1
2,308,994	+		IAI47_10930	0.24	+1.5
2,308,994	+		IAI47_10930	0.24	+1.0
2,308,994	+		IAI47_10930	0.24	-0.4
2,308,994	+		IAI47_10930	0.24	+0.6
2,308,995	-		IAI47_10930	0.24	+0.6
2,308,995	-		IAI47_10930	0.24	+0.5
2,308,995	-		IAI47_10930	0.24	+0.7
2,308,998	+		IAI47_10930	0.25	+1.2
2,308,999	-		IAI47_10930	0.25	+2.5
2,309,070	+		IAI47_10930	0.40	+4.6
2,309,070	+		IAI47_10930	0.40	-1.5
2,309,150	+		IAI47_10930	0.58	+0.7
2,309,150	+		IAI47_10930	0.58	-2.0
2,309,151	-		IAI47_10930	0.58	+2.0
2,309,151	-		IAI47_10930	0.58	-0.5
2,309,151	-		IAI47_10930	0.58	-1.9
2,309,196	-		IAI47_10930	0.68	+1.0
2,309,277	+		IAI47_10930	0.85	-1.5
2,309,277	+		IAI47_10930	0.85	-0.6
2,309,277	+		IAI47_10930	0.85	+0.3
2,309,278	-		IAI47_10930	0.86	+1.0
2,309,320	+				-1.8
2,309,321	-				+1.6
2,309,367	+				-1.1
2,309,367	+				-1.2
2,309,368	-				-3.8
2,309,378	+				-1.7
2,309,378	+				+3.6
2,309,378	+				-0.4
2,309,378	+				-1.5
2,309,378	+				+2.0
2,309,379	-				+0.4
2,309,379	-				-0.3
2,309,379	-				+0.8
2,309,383	+				-0.8
2,309,383	+				-0.9
2,309,383	+				-0.6
2,309,384	-				-0.8
2,309,389	+				+4.4
2,309,403	+				+1.5
2,309,403	+				+1.1
2,309,403	+				-1.7
2,309,403	+				-0.2
2,309,403	+				+2.5
2,309,403	+				+1.4
2,309,404	-				+0.3
2,309,404	-				+0.7
2,309,404	-				+0.8
2,309,404	-				+0.5
2,309,404	-				+0.5
2,309,404	-				-0.1
2,309,473	+				+1.2
2,309,612	+		IAI47_10935	0.27	+0.2
2,309,613	-		IAI47_10935	0.27	-1.8
2,309,697	+		IAI47_10935	0.38	+0.6
2,309,697	+		IAI47_10935	0.38	+0.2
2,309,803	-		IAI47_10935	0.52	-1.5
2,309,803	-		IAI47_10935	0.52	+1.9
2,309,808	-		IAI47_10935	0.53	-0.8
2,309,837	+		IAI47_10935	0.57	+0.4
2,309,837	+		IAI47_10935	0.57	-0.3
2,309,838	-				+2.2
2,309,886	+		IAI47_10935	0.63	-0.0
2,309,886	+		IAI47_10935	0.63	+0.0
2,309,886	+		IAI47_10935	0.63	+0.9
2,309,887	-		IAI47_10935	0.63	-1.0
2,309,887	-		IAI47_10935	0.63	-0.2
2,309,890	+		IAI47_10935	0.64	+2.2
2,309,890	+		IAI47_10935	0.64	+2.2
2,309,890	+		IAI47_10935	0.64	+1.6
2,309,891	-		IAI47_10935	0.64	-0.3
2,310,042	+		IAI47_10935	0.84	-0.9
2,310,042	+		IAI47_10935	0.84	-0.6
2,310,042	+		IAI47_10935	0.84	+1.2
2,310,042	+		IAI47_10935	0.84	-1.3
2,310,042	+		IAI47_10935	0.84	+1.4
2,310,042	+		IAI47_10935	0.84	-2.1
2,310,043	-		IAI47_10935	0.84	-1.3
2,310,043	-		IAI47_10935	0.84	+1.1
2,310,043	-		IAI47_10935	0.84	-0.7
2,310,043	-		IAI47_10935	0.84	+0.4
2,310,053	+		IAI47_10935	0.85	-1.7
2,310,053	+		IAI47_10935	0.85	+0.2
2,310,153	+				+0.0
2,310,154	-				-1.1
2,310,154	-				-1.8
2,310,154	-				+0.6
2,310,163	+				-0.6
2,310,163	+				-0.8
2,310,164	-				-2.3
2,310,164	-				-0.5
2,310,164	-				-0.2
2,310,164	-				+0.7
2,310,182	+				-2.6
2,310,218	+		IAI47_10940	0.10	+0.7
2,310,218	+		IAI47_10940	0.10	-0.3
2,310,218	+		IAI47_10940	0.10	-2.2
2,310,218	+		IAI47_10940	0.10	-0.3
2,310,219	-		IAI47_10940	0.10	-2.3
2,310,219	-		IAI47_10940	0.10	-1.5
2,310,219	-		IAI47_10940	0.10	-3.0
2,310,317	+		IAI47_10940	0.28	-1.2
2,310,317	+		IAI47_10940	0.28	+0.2
2,310,317	+		IAI47_10940	0.28	-2.0
2,310,318	-		IAI47_10940	0.29	+0.7
2,310,327	-		IAI47_10940	0.30	-2.4
2,310,327	-		IAI47_10940	0.30	-0.1
2,310,391	+		IAI47_10940	0.42	-1.5
2,310,391	+		IAI47_10940	0.42	-1.4
2,310,391	+		IAI47_10940	0.42	+0.8
2,310,392	-		IAI47_10940	0.42	+2.0
2,310,392	-		IAI47_10940	0.42	-0.6
2,310,454	+		IAI47_10940	0.53	-1.6
2,310,454	+		IAI47_10940	0.53	+1.2
2,310,454	+		IAI47_10940	0.53	-0.7
2,310,454	+		IAI47_10940	0.53	-1.8
2,310,454	+		IAI47_10940	0.53	-0.1
2,310,454	+		IAI47_10940	0.53	+0.7
2,310,455	-		IAI47_10940	0.54	-0.3
2,310,455	-		IAI47_10940	0.54	-2.0
2,310,455	-		IAI47_10940	0.54	-1.6
2,310,455	-		IAI47_10940	0.54	+0.3
2,310,455	-		IAI47_10940	0.54	-0.4
2,310,455	-		IAI47_10940	0.54	-1.2
2,310,535	-		IAI47_10940	0.68	-0.2
2,310,586	+		IAI47_10940	0.78	-1.5
2,310,587	-		IAI47_10940	0.78	+0.6
2,310,587	-		IAI47_10940	0.78	+0.7
2,310,608	+		IAI47_10940	0.82	-0.6
2,310,608	+		IAI47_10940	0.82	-1.2
2,310,608	+		IAI47_10940	0.82	-0.2
2,310,609	-		IAI47_10940	0.82	+0.3
2,310,609	-		IAI47_10940	0.82	-0.3
2,310,609	-		IAI47_10940	0.82	-1.8
2,310,609	-		IAI47_10940	0.82	-0.6
2,310,680	+				-0.9
2,310,680	+				+0.3
2,310,697	+				-1.1
2,310,697	+				-3.3
2,310,698	-				-2.0
2,310,698	-				-0.3
2,310,698	-				-2.8
2,310,698	-				-0.0
2,310,710	+				+2.1
2,310,711	-				-0.2
2,310,711	-				-2.2
2,310,714	+				+0.5
2,310,758	+				-0.0
2,310,778	+				+1.0
2,310,824	-				-1.2
2,310,824	-				-0.8
2,310,824	-				-0.5
2,310,824	-				+0.2
2,310,824	-				+0.8
2,311,005	+		IAI47_10945	0.25	+0.2
2,311,006	-		IAI47_10945	0.25	-1.4
2,311,041	+		IAI47_10945	0.29	-0.9
2,311,049	+		IAI47_10945	0.30	-2.3
2,311,050	-		IAI47_10945	0.30	-0.3