Strain Fitness in Pantoea sp. MT58 around IAI47_04840

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, aerobic
1,014,453	+		IAI47_04835	0.38	-1.3
1,014,453	+		IAI47_04835	0.38	-1.1
1,014,515	-		IAI47_04835	0.42	-2.4
1,014,570	-		IAI47_04835	0.46	-1.2
1,014,570	-		IAI47_04835	0.46	-1.8
1,014,603	+		IAI47_04835	0.49	-0.7
1,014,603	+		IAI47_04835	0.49	-1.9
1,014,606	+		IAI47_04835	0.49	-1.6
1,014,739	+		IAI47_04835	0.59	+1.1
1,014,791	-		IAI47_04835	0.63	+0.1
1,014,864	+		IAI47_04835	0.68	-0.5
1,014,864	+		IAI47_04835	0.68	-1.2
1,014,898	+		IAI47_04835	0.71	-0.9
1,014,898	+		IAI47_04835	0.71	-1.0
1,014,936	+		IAI47_04835	0.74	-1.0
1,014,936	+		IAI47_04835	0.74	-1.4
1,014,936	+		IAI47_04835	0.74	-1.0
1,014,936	+		IAI47_04835	0.74	-1.1
1,014,936	+		IAI47_04835	0.74	-2.0
1,014,937	-		IAI47_04835	0.74	-2.1
1,014,937	-		IAI47_04835	0.74	-0.7
1,014,937	-		IAI47_04835	0.74	-2.2
1,014,976	+		IAI47_04835	0.77	+0.2
1,014,976	+		IAI47_04835	0.77	-0.3
1,014,976	+		IAI47_04835	0.77	-0.1
1,014,977	-		IAI47_04835	0.77	-0.7
1,014,977	-		IAI47_04835	0.77	-0.1
1,015,111	-		IAI47_04835	0.87	+0.7
1,015,111	-		IAI47_04835	0.87	-0.9
1,015,111	-		IAI47_04835	0.87	+1.0
1,015,111	-		IAI47_04835	0.87	-1.5
1,015,136	-		IAI47_04835	0.89	-0.7
1,015,235	+				-1.0
1,015,236	-				-3.8
1,015,236	-				+1.7
1,015,236	-				-0.0
1,015,274	+				-0.4
1,015,275	-				-1.4
1,015,275	-				-2.7
1,015,287	+				+0.1
1,015,288	-				-1.9
1,015,288	-				+0.3
1,015,310	-				-1.8
1,015,310	-				+0.1
1,015,310	-				-0.5
1,015,311	+				+0.7
1,015,312	-				-0.5
1,015,312	-				-0.0
1,015,340	+				+0.4
1,015,341	-				+3.1
1,015,399	+				-0.9
1,015,399	+				-2.1
1,015,399	+				+0.2
1,015,399	+				-0.9
1,015,400	-				+1.8
1,015,400	-				-1.1
1,015,438	+				-0.1
1,015,439	-				-0.2
1,015,439	-				-0.9
1,015,439	-				+1.4
1,015,439	-				+0.2
1,015,458	+				+0.4
1,015,459	-				+0.1
1,015,459	-				-1.2
1,015,481	+				-0.8
1,015,497	+				+0.8
1,015,497	+				-2.1
1,015,497	+				-2.0
1,015,497	+				-2.3
1,015,498	-				-1.5
1,015,498	-				+1.9
1,015,498	-				+1.4
1,015,503	+				-2.5
1,015,630	-		IAI47_04840	0.24	-0.3
1,015,750	-		IAI47_04840	0.40	+1.7
1,015,750	-		IAI47_04840	0.40	+0.9
1,015,750	-		IAI47_04840	0.40	+1.1
1,015,750	-		IAI47_04840	0.40	+0.7
1,015,797	+		IAI47_04840	0.47	+1.6
1,015,798	-		IAI47_04840	0.47	+2.1
1,015,805	-		IAI47_04840	0.48	-2.4
1,015,805	-		IAI47_04840	0.48	+0.7
1,015,812	+		IAI47_04840	0.49	-0.5
1,015,832	-		IAI47_04840	0.51	-0.3
1,015,857	+		IAI47_04840	0.55	-1.0
1,015,858	-		IAI47_04840	0.55	+0.1
1,015,913	+		IAI47_04840	0.62	+0.2
1,015,913	+		IAI47_04840	0.62	-2.1
1,015,913	+		IAI47_04840	0.62	+0.6
1,015,913	+		IAI47_04840	0.62	-0.1
1,015,913	+		IAI47_04840	0.62	-0.2
1,015,913	+		IAI47_04840	0.62	-0.2
1,015,914	-		IAI47_04840	0.62	-0.6
1,015,914	-		IAI47_04840	0.62	-0.6
1,015,914	-		IAI47_04840	0.62	+0.7
1,015,914	-		IAI47_04840	0.62	-1.3
1,015,914	-		IAI47_04840	0.62	+0.0
1,016,002	-		IAI47_04840	0.74	-0.7
1,016,002	-		IAI47_04840	0.74	-0.8
1,016,047	+		IAI47_04840	0.80	-0.5
1,016,047	+		IAI47_04840	0.80	+1.5
1,016,048	-		IAI47_04840	0.80	+1.0
1,016,048	-		IAI47_04840	0.80	-1.6
1,016,048	-		IAI47_04840	0.80	+0.5
1,016,108	+		IAI47_04840	0.88	-2.5
1,016,109	-		IAI47_04840	0.88	+0.3
1,016,109	-		IAI47_04840	0.88	+1.1
1,016,146	+				-2.1
1,016,182	+				+0.9
1,016,183	-				-2.0
1,016,183	-				+0.3
1,016,183	-				+1.3
1,016,183	-				+1.5
1,016,183	-				-0.8
1,016,183	-				+2.8
1,016,194	+				+0.3
1,016,195	-				-2.6
1,016,195	-				-1.7
1,016,236	-				+1.5
1,016,298	+				-1.0
1,016,298	+				+0.5
1,016,298	+				-0.3
1,016,299	-				+0.1
1,016,299	-				+0.7
1,016,299	-				-1.9
1,016,345	+		IAI47_04845	0.10	+0.1
1,016,346	-		IAI47_04845	0.10	-1.0
1,016,346	-		IAI47_04845	0.10	+1.2
1,016,346	-		IAI47_04845	0.10	-1.8
1,016,368	+		IAI47_04845	0.12	-2.7
1,016,369	-		IAI47_04845	0.12	-0.9
1,016,371	+		IAI47_04845	0.12	-1.1
1,016,371	+		IAI47_04845	0.12	-0.5
1,016,371	+		IAI47_04845	0.12	-2.5
1,016,371	+		IAI47_04845	0.12	+0.5
1,016,371	+		IAI47_04845	0.12	-0.1
1,016,372	-		IAI47_04845	0.12	+0.7
1,016,372	-		IAI47_04845	0.12	-3.0
1,016,372	-		IAI47_04845	0.12	-0.5
1,016,372	-		IAI47_04845	0.12	-1.7
1,016,372	-		IAI47_04845	0.12	-2.0
1,016,399	+		IAI47_04845	0.13	-1.3
1,016,444	+		IAI47_04845	0.16	+1.1
1,016,445	-		IAI47_04845	0.16	-1.0
1,016,445	-		IAI47_04845	0.16	+1.2
1,016,452	+		IAI47_04845	0.17	-0.0
1,016,452	+		IAI47_04845	0.17	+0.2
1,016,453	-		IAI47_04845	0.17	+1.3
1,016,453	-		IAI47_04845	0.17	+2.7
1,016,453	-		IAI47_04845	0.17	+0.4
1,016,453	-		IAI47_04845	0.17	+0.2
1,016,453	-		IAI47_04845	0.17	+0.2
1,016,453	-		IAI47_04845	0.17	+0.3
1,016,453	-		IAI47_04845	0.17	-2.2
1,016,462	+		IAI47_04845	0.17	+0.6
1,016,462	+		IAI47_04845	0.17	+0.9
1,016,463	-		IAI47_04845	0.17	-1.3
1,016,463	-		IAI47_04845	0.17	-1.3
1,016,467	-		IAI47_04845	0.18	+3.1
1,016,467	-		IAI47_04845	0.18	-1.2
1,016,467	-		IAI47_04845	0.18	-2.9
1,016,486	+		IAI47_04845	0.19	-1.8
1,016,486	+		IAI47_04845	0.19	+1.0
1,016,486	+		IAI47_04845	0.19	+1.6
1,016,486	+		IAI47_04845	0.19	+0.5
1,016,487	-		IAI47_04845	0.19	-0.1
1,016,487	-		IAI47_04845	0.19	-0.5
1,016,497	-		IAI47_04845	0.20	-0.2
1,016,608	+		IAI47_04845	0.26	+0.2
1,016,608	+		IAI47_04845	0.26	-2.6
1,016,608	+		IAI47_04845	0.26	-0.6
1,016,609	-		IAI47_04845	0.26	-0.9
1,016,609	-		IAI47_04845	0.26	+0.7
1,016,668	+		IAI47_04845	0.30	+1.4
1,016,668	+		IAI47_04845	0.30	-0.3
1,016,668	+		IAI47_04845	0.30	+2.2
1,016,669	-		IAI47_04845	0.30	+0.1
1,016,669	-		IAI47_04845	0.30	-1.3
1,016,669	-		IAI47_04845	0.30	-1.7
1,016,669	-		IAI47_04845	0.30	-0.8
1,016,689	+		IAI47_04845	0.31	-0.9
1,016,689	+		IAI47_04845	0.31	+0.3
1,016,689	+		IAI47_04845	0.31	-0.1
1,016,689	+		IAI47_04845	0.31	+0.0
1,016,689	+		IAI47_04845	0.31	-0.2
1,016,689	+		IAI47_04845	0.31	-0.6
1,016,689	+		IAI47_04845	0.31	-0.0
1,016,690	-		IAI47_04845	0.31	+0.6
1,016,690	-		IAI47_04845	0.31	-0.6
1,016,690	-		IAI47_04845	0.31	+0.6
1,016,690	-		IAI47_04845	0.31	+0.4
1,016,746	+		IAI47_04845	0.35	-1.5
1,016,746	+		IAI47_04845	0.35	-0.0
1,016,746	+		IAI47_04845	0.35	+1.0
1,016,746	+		IAI47_04845	0.35	-1.7
1,016,746	+		IAI47_04845	0.35	-1.9
1,016,746	+		IAI47_04845	0.35	-1.3
1,016,746	+		IAI47_04845	0.35	+0.5
1,016,747	-		IAI47_04845	0.35	-2.3
1,016,747	-		IAI47_04845	0.35	-1.6
1,016,747	-		IAI47_04845	0.35	-1.4
1,016,747	-		IAI47_04845	0.35	+1.7
1,016,747	-		IAI47_04845	0.35	-1.2
1,016,747	-		IAI47_04845	0.35	-2.2
1,016,747	-		IAI47_04845	0.35	-2.3
1,016,747	-		IAI47_04845	0.35	+0.9
1,016,815	+		IAI47_04845	0.39	-0.0
1,016,815	+		IAI47_04845	0.39	-1.2
1,016,816	-		IAI47_04845	0.39	+0.0
1,016,816	-		IAI47_04845	0.39	+0.5
1,016,816	-		IAI47_04845	0.39	-0.6
1,016,816	-		IAI47_04845	0.39	-0.1
1,016,872	+		IAI47_04845	0.43	+1.3
1,016,872	+		IAI47_04845	0.43	+0.4
1,016,872	+		IAI47_04845	0.43	+0.2
1,016,872	+		IAI47_04845	0.43	-0.7
1,016,872	+		IAI47_04845	0.43	-0.8
1,016,872	+		IAI47_04845	0.43	+0.4
1,016,872	+		IAI47_04845	0.43	-0.6
1,016,872	+		IAI47_04845	0.43	-1.3
1,016,872	+		IAI47_04845	0.43	+0.4
1,016,872	+		IAI47_04845	0.43	+0.4
1,016,873	-		IAI47_04845	0.43	-2.2
1,016,873	-		IAI47_04845	0.43	+1.5
1,016,873	-		IAI47_04845	0.43	-1.7
1,016,873	-		IAI47_04845	0.43	-0.6
1,016,876	+		IAI47_04845	0.43	-0.8
1,016,876	+		IAI47_04845	0.43	-0.3
1,016,876	+		IAI47_04845	0.43	-0.9
1,016,876	+		IAI47_04845	0.43	-0.5
1,016,876	+		IAI47_04845	0.43	+1.6
1,016,876	+		IAI47_04845	0.43	+0.8
1,016,876	+		IAI47_04845	0.43	-1.1
1,016,876	+		IAI47_04845	0.43	-1.0
1,016,876	+		IAI47_04845	0.43	-1.1
1,016,876	+		IAI47_04845	0.43	-1.0
1,016,876	+		IAI47_04845	0.43	+0.4
1,016,876	+		IAI47_04845	0.43	+0.2
1,016,876	+		IAI47_04845	0.43	+1.3
1,016,876	+		IAI47_04845	0.43	-0.5
1,016,876	+		IAI47_04845	0.43	-0.3
1,016,876	+		IAI47_04845	0.43	+0.7
1,016,876	+		IAI47_04845	0.43	-0.9
1,016,876	+		IAI47_04845	0.43	-1.2
1,016,876	+		IAI47_04845	0.43	+1.1
1,016,877	-		IAI47_04845	0.43	-2.1
1,016,877	-		IAI47_04845	0.43	-0.6
1,016,877	-		IAI47_04845	0.43	-1.2
1,016,877	-		IAI47_04845	0.43	-0.6
1,016,877	-		IAI47_04845	0.43	-1.1
1,016,877	-		IAI47_04845	0.43	+0.4
1,016,877	-		IAI47_04845	0.43	+1.2
1,016,877	-		IAI47_04845	0.43	+1.1
1,016,877	-		IAI47_04845	0.43	+0.4
1,016,877	-		IAI47_04845	0.43	-2.7
1,016,877	-		IAI47_04845	0.43	-0.0
1,016,877	-		IAI47_04845	0.43	-1.3
1,016,877	-		IAI47_04845	0.43	-2.7
1,016,877	-		IAI47_04845	0.43	-0.3
1,016,877	-		IAI47_04845	0.43	-2.2
1,016,877	-		IAI47_04845	0.43	-1.5
1,016,877	-		IAI47_04845	0.43	-1.8
1,016,877	-		IAI47_04845	0.43	-0.3
1,016,877	-		IAI47_04845	0.43	+0.2
1,016,877	-		IAI47_04845	0.43	+0.3
1,017,015	+		IAI47_04845	0.51	+0.3
1,017,027	+		IAI47_04845	0.52	-0.7
1,017,163	+		IAI47_04845	0.61	+2.0
1,017,163	+		IAI47_04845	0.61	-0.0
1,017,163	+		IAI47_04845	0.61	-1.4
1,017,163	+		IAI47_04845	0.61	-1.5
1,017,163	+		IAI47_04845	0.61	+2.2
1,017,163	+		IAI47_04845	0.61	+0.3
1,017,164	-		IAI47_04845	0.61	-0.6
1,017,164	-		IAI47_04845	0.61	+0.2
1,017,164	-		IAI47_04845	0.61	-0.8
1,017,169	+		IAI47_04845	0.61	-0.9
1,017,170	-		IAI47_04845	0.61	-2.9
1,017,170	-		IAI47_04845	0.61	+0.2
1,017,170	-		IAI47_04845	0.61	+1.2
1,017,170	-		IAI47_04845	0.61	-1.0