Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS24750 and CA265_RS24755 are separated by 123 nucleotides CA265_RS24755 and CA265_RS24760 are separated by 105 nucleotides CA265_RS24760 and CA265_RS24765 overlap by 8 nucleotides CA265_RS24765 and CA265_RS24770 are separated by 291 nucleotides
CA265_RS24750: CA265_RS24750 - hypothetical protein, at 6,044,153 to 6,044,818
_RS24750
CA265_RS24755: CA265_RS24755 - hypothetical protein, at 6,044,942 to 6,045,349
_RS24755
CA265_RS24760: CA265_RS24760 - DNA replication and repair protein RecF, at 6,045,455 to 6,046,558
_RS24760
CA265_RS24765: CA265_RS24765 - RNA-binding protein, at 6,046,551 to 6,046,841
_RS24765
CA265_RS24770: CA265_RS24770 - hypothetical protein, at 6,047,133 to 6,047,312
_RS24770
Position (kb)
6045
6046
6047 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6044.501 kb on - strand, within CA265_RS24750 at 6044.548 kb on - strand, within CA265_RS24750 at 6044.708 kb on + strand, within CA265_RS24750 at 6044.867 kb on + strand at 6044.868 kb on - strand at 6044.887 kb on + strand at 6044.907 kb on - strand at 6044.949 kb on - strand at 6044.957 kb on - strand at 6044.961 kb on - strand at 6044.966 kb on - strand at 6045.129 kb on + strand, within CA265_RS24755 at 6045.129 kb on + strand, within CA265_RS24755 at 6045.130 kb on - strand, within CA265_RS24755 at 6045.130 kb on - strand, within CA265_RS24755 at 6045.130 kb on - strand, within CA265_RS24755 at 6045.130 kb on - strand, within CA265_RS24755 at 6045.140 kb on + strand, within CA265_RS24755 at 6045.141 kb on - strand, within CA265_RS24755 at 6045.292 kb on + strand, within CA265_RS24755 at 6045.306 kb on + strand, within CA265_RS24755 at 6045.307 kb on - strand, within CA265_RS24755 at 6045.365 kb on - strand at 6045.373 kb on - strand at 6045.420 kb on - strand at 6045.451 kb on - strand at 6045.451 kb on - strand at 6045.451 kb on - strand at 6045.454 kb on + strand at 6045.494 kb on + strand at 6045.495 kb on - strand at 6045.495 kb on - strand at 6045.497 kb on - strand at 6045.548 kb on - strand at 6045.559 kb on + strand at 6045.568 kb on + strand, within CA265_RS24760 at 6045.587 kb on + strand, within CA265_RS24760 at 6045.588 kb on - strand, within CA265_RS24760 at 6045.602 kb on - strand, within CA265_RS24760 at 6045.602 kb on - strand, within CA265_RS24760 at 6045.758 kb on + strand, within CA265_RS24760 at 6045.820 kb on - strand, within CA265_RS24760 at 6045.829 kb on + strand, within CA265_RS24760 at 6045.866 kb on - strand, within CA265_RS24760 at 6045.915 kb on - strand, within CA265_RS24760 at 6045.915 kb on - strand, within CA265_RS24760 at 6046.032 kb on + strand, within CA265_RS24760 at 6046.086 kb on - strand, within CA265_RS24760 at 6046.089 kb on - strand, within CA265_RS24760 at 6046.094 kb on + strand, within CA265_RS24760 at 6046.095 kb on - strand, within CA265_RS24760 at 6046.130 kb on + strand, within CA265_RS24760 at 6046.153 kb on + strand, within CA265_RS24760 at 6046.198 kb on - strand, within CA265_RS24760 at 6046.326 kb on - strand, within CA265_RS24760 at 6046.326 kb on - strand, within CA265_RS24760 at 6046.332 kb on - strand, within CA265_RS24760 at 6046.332 kb on - strand, within CA265_RS24760 at 6046.355 kb on - strand, within CA265_RS24760 at 6046.452 kb on + strand at 6046.453 kb on - strand at 6046.456 kb on + strand at 6046.456 kb on + strand at 6046.516 kb on - strand at 6046.516 kb on - strand at 6046.531 kb on - strand at 6046.839 kb on + strand at 6046.844 kb on - strand at 6046.856 kb on - strand at 6046.864 kb on + strand at 6046.910 kb on + strand at 6046.910 kb on + strand at 6047.062 kb on + strand at 6047.068 kb on + strand at 6047.068 kb on + strand at 6047.114 kb on + strand at 6047.193 kb on + strand, within CA265_RS24770 at 6047.194 kb on - strand, within CA265_RS24770 at 6047.198 kb on + strand, within CA265_RS24770 at 6047.199 kb on - strand at 6047.232 kb on - strand, within CA265_RS24770 at 6047.238 kb on + strand, within CA265_RS24770 at 6047.238 kb on + strand, within CA265_RS24770 at 6047.314 kb on + strand at 6047.316 kb on - strand at 6047.325 kb on + strand at 6047.329 kb on + strand at 6047.330 kb on - strand at 6047.414 kb on - strand at 6047.425 kb on + strand at 6047.425 kb on + strand at 6047.500 kb on + strand at 6047.500 kb on + strand at 6047.500 kb on + strand at 6047.500 kb on + strand at 6047.501 kb on - strand at 6047.503 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 6,044,501 - CA265_RS24750 0.52 +0.7 6,044,548 - CA265_RS24750 0.59 -0.9 6,044,708 + CA265_RS24750 0.83 -0.3 6,044,867 + +1.4 6,044,868 - +0.9 6,044,887 + +0.5 6,044,907 - +0.6 6,044,949 - -0.2 6,044,957 - +0.4 6,044,961 - +1.8 6,044,966 - +1.3 6,045,129 + CA265_RS24755 0.46 -0.6 6,045,129 + CA265_RS24755 0.46 +0.4 6,045,130 - CA265_RS24755 0.46 +1.1 6,045,130 - CA265_RS24755 0.46 -0.3 6,045,130 - CA265_RS24755 0.46 +0.5 6,045,130 - CA265_RS24755 0.46 +0.8 6,045,140 + CA265_RS24755 0.49 -1.5 6,045,141 - CA265_RS24755 0.49 +0.8 6,045,292 + CA265_RS24755 0.86 -0.2 6,045,306 + CA265_RS24755 0.89 +0.7 6,045,307 - CA265_RS24755 0.89 -0.5 6,045,365 - +0.2 6,045,373 - +0.3 6,045,420 - +1.4 6,045,451 - -2.9 6,045,451 - -1.4 6,045,451 - -0.8 6,045,454 + +0.8 6,045,494 + -1.4 6,045,495 - -2.3 6,045,495 - -1.4 6,045,497 - -1.3 6,045,548 - -1.7 6,045,559 + -1.3 6,045,568 + CA265_RS24760 0.10 -0.6 6,045,587 + CA265_RS24760 0.12 -1.3 6,045,588 - CA265_RS24760 0.12 -1.2 6,045,602 - CA265_RS24760 0.13 +0.7 6,045,602 - CA265_RS24760 0.13 -2.7 6,045,758 + CA265_RS24760 0.27 -3.1 6,045,820 - CA265_RS24760 0.33 -1.9 6,045,829 + CA265_RS24760 0.34 -1.7 6,045,866 - CA265_RS24760 0.37 -1.1 6,045,915 - CA265_RS24760 0.42 -1.1 6,045,915 - CA265_RS24760 0.42 -2.3 6,046,032 + CA265_RS24760 0.52 -1.5 6,046,086 - CA265_RS24760 0.57 -0.2 6,046,089 - CA265_RS24760 0.57 -1.3 6,046,094 + CA265_RS24760 0.58 -0.6 6,046,095 - CA265_RS24760 0.58 -0.8 6,046,130 + CA265_RS24760 0.61 -0.7 6,046,153 + CA265_RS24760 0.63 -1.1 6,046,198 - CA265_RS24760 0.67 -1.1 6,046,326 - CA265_RS24760 0.79 -1.5 6,046,326 - CA265_RS24760 0.79 -0.8 6,046,332 - CA265_RS24760 0.79 -0.4 6,046,332 - CA265_RS24760 0.79 -1.1 6,046,355 - CA265_RS24760 0.82 -1.7 6,046,452 + -0.9 6,046,453 - -0.4 6,046,456 + -0.2 6,046,456 + -1.8 6,046,516 - -1.1 6,046,516 - -2.0 6,046,531 - -1.6 6,046,839 + +0.7 6,046,844 - +0.1 6,046,856 - -0.9 6,046,864 + +0.4 6,046,910 + +0.3 6,046,910 + +0.4 6,047,062 + -0.2 6,047,068 + +0.1 6,047,068 + -0.6 6,047,114 + -0.2 6,047,193 + CA265_RS24770 0.33 -0.1 6,047,194 - CA265_RS24770 0.34 -0.5 6,047,198 + CA265_RS24770 0.36 +0.3 6,047,199 - -0.3 6,047,232 - CA265_RS24770 0.55 +1.7 6,047,238 + CA265_RS24770 0.58 -2.3 6,047,238 + CA265_RS24770 0.58 +0.1 6,047,314 + +0.3 6,047,316 - -0.2 6,047,325 + -0.1 6,047,329 + +0.1 6,047,330 - -0.8 6,047,414 - -0.7 6,047,425 + -0.1 6,047,425 + +0.7 6,047,500 + -0.3 6,047,500 + +1.0 6,047,500 + -0.4 6,047,500 + +0.4 6,047,501 - -0.5 6,047,503 - -0.3
Or see this region's nucleotide sequence