Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_12060 and IAI47_12065 are separated by 85 nucleotides IAI47_12065 and IAI47_12070 are separated by 154 nucleotides IAI47_12070 and IAI47_12075 are separated by 10 nucleotides
IAI47_12060: IAI47_12060 - beta-ketoacyl-ACP synthase II, at 2,553,931 to 2,555,172
_12060
IAI47_12065: IAI47_12065 - acyl carrier protein, at 2,555,258 to 2,555,494
_12065
IAI47_12070: IAI47_12070 - 3-oxoacyl-ACP reductase FabG, at 2,555,649 to 2,556,383
_12070
IAI47_12075: IAI47_12075 - ACP S-malonyltransferase, at 2,556,394 to 2,557,326
_12075
Position (kb)
2555
2556 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2554.258 kb on - strand, within IAI47_12060 at 2554.275 kb on - strand, within IAI47_12060 at 2554.275 kb on - strand, within IAI47_12060 at 2554.370 kb on + strand, within IAI47_12060 at 2554.371 kb on - strand, within IAI47_12060 at 2554.371 kb on - strand, within IAI47_12060 at 2554.633 kb on - strand, within IAI47_12060 at 2554.635 kb on - strand, within IAI47_12060 at 2554.644 kb on + strand, within IAI47_12060 at 2554.644 kb on + strand, within IAI47_12060 at 2554.645 kb on - strand, within IAI47_12060 at 2554.680 kb on + strand, within IAI47_12060 at 2554.681 kb on - strand, within IAI47_12060 at 2554.722 kb on - strand, within IAI47_12060 at 2554.722 kb on - strand, within IAI47_12060 at 2554.752 kb on + strand, within IAI47_12060 at 2554.815 kb on + strand, within IAI47_12060 at 2554.816 kb on - strand, within IAI47_12060 at 2554.816 kb on - strand, within IAI47_12060 at 2554.927 kb on - strand, within IAI47_12060 at 2554.934 kb on - strand, within IAI47_12060 at 2554.988 kb on + strand, within IAI47_12060 at 2554.989 kb on - strand, within IAI47_12060 at 2555.104 kb on - strand at 2555.111 kb on - strand at 2555.156 kb on - strand at 2555.156 kb on - strand at 2555.167 kb on - strand at 2555.196 kb on + strand at 2555.197 kb on - strand at 2555.197 kb on - strand at 2555.204 kb on + strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.205 kb on - strand at 2555.603 kb on - strand at 2555.647 kb on + strand at 2555.648 kb on - strand at 2555.648 kb on - strand at 2555.648 kb on - strand at 2555.660 kb on - strand at 2555.660 kb on - strand at 2556.396 kb on - strand at 2556.396 kb on - strand at 2556.430 kb on - strand at 2556.430 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,554,258 - IAI47_12060 0.26 -1.7 2,554,275 - IAI47_12060 0.28 -1.5 2,554,275 - IAI47_12060 0.28 -1.3 2,554,370 + IAI47_12060 0.35 +3.2 2,554,371 - IAI47_12060 0.35 +0.2 2,554,371 - IAI47_12060 0.35 +0.2 2,554,633 - IAI47_12060 0.57 +2.2 2,554,635 - IAI47_12060 0.57 +1.2 2,554,644 + IAI47_12060 0.57 -1.6 2,554,644 + IAI47_12060 0.57 +2.6 2,554,645 - IAI47_12060 0.57 -0.8 2,554,680 + IAI47_12060 0.60 -1.4 2,554,681 - IAI47_12060 0.60 +1.3 2,554,722 - IAI47_12060 0.64 -3.1 2,554,722 - IAI47_12060 0.64 +0.1 2,554,752 + IAI47_12060 0.66 -0.1 2,554,815 + IAI47_12060 0.71 +2.2 2,554,816 - IAI47_12060 0.71 -0.6 2,554,816 - IAI47_12060 0.71 -1.7 2,554,927 - IAI47_12060 0.80 -0.8 2,554,934 - IAI47_12060 0.81 +1.9 2,554,988 + IAI47_12060 0.85 -2.1 2,554,989 - IAI47_12060 0.85 +0.6 2,555,104 - -1.3 2,555,111 - -1.2 2,555,156 - -1.4 2,555,156 - -0.4 2,555,167 - -1.0 2,555,196 + +2.2 2,555,197 - +0.8 2,555,197 - +0.2 2,555,204 + -1.6 2,555,205 - -1.5 2,555,205 - -1.2 2,555,205 - -1.7 2,555,205 - -2.1 2,555,205 - -1.7 2,555,205 - -1.3 2,555,205 - -0.4 2,555,205 - -0.6 2,555,603 - -1.0 2,555,647 + +1.9 2,555,648 - -0.6 2,555,648 - -0.1 2,555,648 - +0.3 2,555,660 - -1.3 2,555,660 - +0.5 2,556,396 - +0.3 2,556,396 - -0.5 2,556,430 - -0.4 2,556,430 - +0.8
Or see this region's nucleotide sequence