Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01200 and BPHYT_RS01205 are separated by 21 nucleotides BPHYT_RS01205 and BPHYT_RS01210 are separated by 32 nucleotides BPHYT_RS01210 and BPHYT_RS01215 are separated by 253 nucleotides
BPHYT_RS01200: BPHYT_RS01200 - hypothetical protein, at 277,162 to 279,012
_RS01200
BPHYT_RS01205: BPHYT_RS01205 - hypothetical protein, at 279,034 to 279,222
_RS01205
BPHYT_RS01210: BPHYT_RS01210 - hypothetical protein, at 279,255 to 280,337
_RS01210
BPHYT_RS01215: BPHYT_RS01215 - hypothetical protein, at 280,591 to 281,583
_RS01215
Position (kb) 279
280
281 Strain fitness (log2 ratio) -1
0
1 at 278.281 kb on + strand, within BPHYT_RS01200 at 278.282 kb on - strand, within BPHYT_RS01200 at 278.296 kb on + strand, within BPHYT_RS01200 at 278.345 kb on - strand, within BPHYT_RS01200 at 278.377 kb on + strand, within BPHYT_RS01200 at 278.378 kb on - strand, within BPHYT_RS01200 at 278.378 kb on - strand, within BPHYT_RS01200 at 278.378 kb on - strand, within BPHYT_RS01200 at 278.608 kb on + strand, within BPHYT_RS01200 at 278.609 kb on - strand, within BPHYT_RS01200 at 279.034 kb on - strand at 279.169 kb on + strand, within BPHYT_RS01205 at 279.362 kb on + strand at 279.363 kb on - strand at 279.387 kb on + strand, within BPHYT_RS01210 at 279.407 kb on + strand, within BPHYT_RS01210 at 279.687 kb on - strand, within BPHYT_RS01210 at 279.687 kb on - strand, within BPHYT_RS01210 at 280.080 kb on - strand, within BPHYT_RS01210 at 280.336 kb on - strand at 280.357 kb on + strand at 280.358 kb on - strand at 280.358 kb on - strand at 280.359 kb on + strand at 280.360 kb on - strand at 280.360 kb on - strand at 280.360 kb on - strand at 280.416 kb on + strand at 280.692 kb on + strand, within BPHYT_RS01215 at 280.845 kb on + strand, within BPHYT_RS01215 at 280.846 kb on - strand, within BPHYT_RS01215 at 280.849 kb on + strand, within BPHYT_RS01215 at 280.849 kb on + strand, within BPHYT_RS01215 at 280.850 kb on - strand, within BPHYT_RS01215 at 280.867 kb on + strand, within BPHYT_RS01215 at 281.195 kb on + strand, within BPHYT_RS01215 at 281.195 kb on + strand, within BPHYT_RS01215 at 281.196 kb on - strand, within BPHYT_RS01215 at 281.196 kb on - strand, within BPHYT_RS01215 at 281.197 kb on + strand, within BPHYT_RS01215 at 281.269 kb on + strand, within BPHYT_RS01215 at 281.270 kb on - strand, within BPHYT_RS01215
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 278,281 + BPHYT_RS01200 0.60 -0.1 278,282 - BPHYT_RS01200 0.61 -0.5 278,296 + BPHYT_RS01200 0.61 -0.4 278,345 - BPHYT_RS01200 0.64 +0.9 278,377 + BPHYT_RS01200 0.66 -0.1 278,378 - BPHYT_RS01200 0.66 +0.1 278,378 - BPHYT_RS01200 0.66 -0.2 278,378 - BPHYT_RS01200 0.66 +0.1 278,608 + BPHYT_RS01200 0.78 -0.8 278,609 - BPHYT_RS01200 0.78 +0.4 279,034 - -0.5 279,169 + BPHYT_RS01205 0.71 +0.2 279,362 + +0.3 279,363 - +0.3 279,387 + BPHYT_RS01210 0.12 -0.4 279,407 + BPHYT_RS01210 0.14 -1.4 279,687 - BPHYT_RS01210 0.40 -0.6 279,687 - BPHYT_RS01210 0.40 -1.7 280,080 - BPHYT_RS01210 0.76 -1.0 280,336 - -0.5 280,357 + +0.1 280,358 - -0.3 280,358 - -0.2 280,359 + +0.1 280,360 - -0.7 280,360 - -0.5 280,360 - +0.0 280,416 + -0.3 280,692 + BPHYT_RS01215 0.10 -0.3 280,845 + BPHYT_RS01215 0.26 +0.3 280,846 - BPHYT_RS01215 0.26 -0.1 280,849 + BPHYT_RS01215 0.26 -0.5 280,849 + BPHYT_RS01215 0.26 -0.2 280,850 - BPHYT_RS01215 0.26 +0.5 280,867 + BPHYT_RS01215 0.28 +0.1 281,195 + BPHYT_RS01215 0.61 +0.0 281,195 + BPHYT_RS01215 0.61 -0.4 281,196 - BPHYT_RS01215 0.61 +0.4 281,196 - BPHYT_RS01215 0.61 +0.1 281,197 + BPHYT_RS01215 0.61 +0.9 281,269 + BPHYT_RS01215 0.68 -0.1 281,270 - BPHYT_RS01215 0.68 +0.1
Or see this region's nucleotide sequence