Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29665 and AO356_29670 are separated by 294 nucleotides AO356_29670 and AO356_29675 are separated by 72 nucleotides AO356_29675 and AO356_29680 are separated by 10 nucleotides
AO356_29665: AO356_29665 - LysR family transcriptional regulator, at 6,900,823 to 6,901,788
_29665
AO356_29670: AO356_29670 - argininosuccinate lyase, at 6,902,083 to 6,903,510
_29670
AO356_29675: AO356_29675 - ABC transporter permease, at 6,903,583 to 6,904,461
_29675
AO356_29680: AO356_29680 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 6,904,472 to 6,905,236
_29680
Position (kb)
6902
6903
6904 Strain fitness (log2 ratio)
-2
-1
0
1 at 6901.133 kb on + strand, within AO356_29665 at 6901.134 kb on - strand, within AO356_29665 at 6901.223 kb on + strand, within AO356_29665 at 6901.224 kb on - strand, within AO356_29665 at 6901.233 kb on - strand, within AO356_29665 at 6901.260 kb on - strand, within AO356_29665 at 6901.501 kb on + strand, within AO356_29665 at 6901.502 kb on - strand, within AO356_29665 at 6901.502 kb on - strand, within AO356_29665 at 6901.582 kb on - strand, within AO356_29665 at 6901.799 kb on + strand at 6902.302 kb on + strand, within AO356_29670 at 6902.468 kb on + strand, within AO356_29670 at 6902.469 kb on - strand, within AO356_29670 at 6902.469 kb on - strand, within AO356_29670 at 6902.469 kb on - strand, within AO356_29670 at 6902.839 kb on - strand, within AO356_29670 at 6902.839 kb on - strand, within AO356_29670 at 6902.839 kb on - strand, within AO356_29670 at 6903.025 kb on - strand, within AO356_29670 at 6903.044 kb on - strand, within AO356_29670 at 6903.101 kb on + strand, within AO356_29670 at 6903.655 kb on + strand at 6903.767 kb on - strand, within AO356_29675 at 6903.925 kb on + strand, within AO356_29675 at 6903.926 kb on - strand, within AO356_29675 at 6903.926 kb on - strand, within AO356_29675 at 6903.928 kb on - strand, within AO356_29675 at 6904.096 kb on + strand, within AO356_29675 at 6904.227 kb on + strand, within AO356_29675 at 6904.504 kb on + strand at 6904.508 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 6,901,133 + AO356_29665 0.32 +1.1 6,901,134 - AO356_29665 0.32 -1.2 6,901,223 + AO356_29665 0.41 -2.5 6,901,224 - AO356_29665 0.42 +0.2 6,901,233 - AO356_29665 0.42 -0.1 6,901,260 - AO356_29665 0.45 -0.3 6,901,501 + AO356_29665 0.70 +0.4 6,901,502 - AO356_29665 0.70 +0.3 6,901,502 - AO356_29665 0.70 -0.5 6,901,582 - AO356_29665 0.79 +0.0 6,901,799 + -0.1 6,902,302 + AO356_29670 0.15 -0.4 6,902,468 + AO356_29670 0.27 -1.9 6,902,469 - AO356_29670 0.27 +0.2 6,902,469 - AO356_29670 0.27 -0.5 6,902,469 - AO356_29670 0.27 -0.9 6,902,839 - AO356_29670 0.53 +0.0 6,902,839 - AO356_29670 0.53 -0.3 6,902,839 - AO356_29670 0.53 -0.5 6,903,025 - AO356_29670 0.66 +0.4 6,903,044 - AO356_29670 0.67 -0.1 6,903,101 + AO356_29670 0.71 -1.7 6,903,655 + +0.6 6,903,767 - AO356_29675 0.21 -1.3 6,903,925 + AO356_29675 0.39 +0.6 6,903,926 - AO356_29675 0.39 +0.6 6,903,926 - AO356_29675 0.39 -0.5 6,903,928 - AO356_29675 0.39 +0.2 6,904,096 + AO356_29675 0.58 +0.1 6,904,227 + AO356_29675 0.73 -0.6 6,904,504 + +0.3 6,904,508 + -0.0
Or see this region's nucleotide sequence