Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25235 and AO356_25240 are separated by 31 nucleotides AO356_25240 and AO356_25245 overlap by 4 nucleotides
AO356_25235: AO356_25235 - anaerobic ribonucleoside-triphosphate reductase, at 5,713,064 to 5,715,079
_25235
AO356_25240: AO356_25240 - oxidoreductase, at 5,715,111 to 5,715,272
_25240
AO356_25245: AO356_25245 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 5,715,269 to 5,715,964
_25245
Position (kb)
5713
5714
5715
5716 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5712.085 kb on + strand at 5712.539 kb on - strand at 5712.728 kb on + strand at 5712.730 kb on + strand at 5712.898 kb on + strand at 5712.899 kb on - strand at 5712.899 kb on - strand at 5713.015 kb on - strand at 5713.041 kb on + strand at 5713.043 kb on + strand at 5713.043 kb on + strand at 5713.043 kb on + strand at 5713.043 kb on + strand at 5713.044 kb on - strand at 5713.044 kb on - strand at 5713.047 kb on + strand at 5713.047 kb on + strand at 5713.307 kb on + strand, within AO356_25235 at 5713.328 kb on + strand, within AO356_25235 at 5713.376 kb on - strand, within AO356_25235 at 5713.409 kb on + strand, within AO356_25235 at 5713.410 kb on - strand, within AO356_25235 at 5713.410 kb on - strand, within AO356_25235 at 5713.527 kb on - strand, within AO356_25235 at 5713.527 kb on - strand, within AO356_25235 at 5713.571 kb on - strand, within AO356_25235 at 5713.598 kb on + strand, within AO356_25235 at 5713.775 kb on + strand, within AO356_25235 at 5713.775 kb on + strand, within AO356_25235 at 5713.776 kb on - strand, within AO356_25235 at 5713.776 kb on - strand, within AO356_25235 at 5713.788 kb on - strand, within AO356_25235 at 5713.788 kb on - strand, within AO356_25235 at 5713.788 kb on - strand, within AO356_25235 at 5713.811 kb on + strand, within AO356_25235 at 5713.847 kb on + strand, within AO356_25235 at 5713.847 kb on + strand, within AO356_25235 at 5713.847 kb on + strand, within AO356_25235 at 5713.847 kb on + strand, within AO356_25235 at 5713.847 kb on + strand, within AO356_25235 at 5713.848 kb on - strand, within AO356_25235 at 5714.019 kb on - strand, within AO356_25235 at 5714.081 kb on + strand, within AO356_25235 at 5714.082 kb on - strand, within AO356_25235 at 5714.082 kb on - strand, within AO356_25235 at 5714.334 kb on - strand, within AO356_25235 at 5714.339 kb on + strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.460 kb on - strand, within AO356_25235 at 5714.471 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.759 kb on + strand, within AO356_25235 at 5714.762 kb on + strand, within AO356_25235 at 5714.763 kb on - strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.874 kb on - strand, within AO356_25235 at 5714.996 kb on + strand at 5715.740 kb on + strand, within AO356_25245 at 5715.741 kb on - strand, within AO356_25245 at 5715.958 kb on + strand at 5715.958 kb on + strand at 5715.959 kb on - strand at 5715.959 kb on - strand at 5715.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 5,712,085 + +0.4 5,712,539 - +0.5 5,712,728 + +0.6 5,712,730 + +0.5 5,712,898 + +0.3 5,712,899 - +0.2 5,712,899 - -0.1 5,713,015 - +0.1 5,713,041 + +0.4 5,713,043 + +0.1 5,713,043 + -0.2 5,713,043 + +0.3 5,713,043 + -0.8 5,713,044 - +0.3 5,713,044 - -0.7 5,713,047 + +0.0 5,713,047 + +0.5 5,713,307 + AO356_25235 0.12 +0.6 5,713,328 + AO356_25235 0.13 -0.1 5,713,376 - AO356_25235 0.15 -0.3 5,713,409 + AO356_25235 0.17 -2.0 5,713,410 - AO356_25235 0.17 -0.1 5,713,410 - AO356_25235 0.17 +1.0 5,713,527 - AO356_25235 0.23 +0.4 5,713,527 - AO356_25235 0.23 +1.9 5,713,571 - AO356_25235 0.25 -0.4 5,713,598 + AO356_25235 0.26 -0.2 5,713,775 + AO356_25235 0.35 +0.7 5,713,775 + AO356_25235 0.35 +0.5 5,713,776 - AO356_25235 0.35 +0.3 5,713,776 - AO356_25235 0.35 +1.7 5,713,788 - AO356_25235 0.36 +1.3 5,713,788 - AO356_25235 0.36 +0.1 5,713,788 - AO356_25235 0.36 +0.7 5,713,811 + AO356_25235 0.37 -0.6 5,713,847 + AO356_25235 0.39 -0.3 5,713,847 + AO356_25235 0.39 -0.9 5,713,847 + AO356_25235 0.39 +1.1 5,713,847 + AO356_25235 0.39 -0.6 5,713,847 + AO356_25235 0.39 +0.7 5,713,848 - AO356_25235 0.39 +0.9 5,714,019 - AO356_25235 0.47 +0.9 5,714,081 + AO356_25235 0.50 +0.9 5,714,082 - AO356_25235 0.50 +1.0 5,714,082 - AO356_25235 0.50 -0.2 5,714,334 - AO356_25235 0.63 +0.0 5,714,339 + AO356_25235 0.63 -0.9 5,714,454 - AO356_25235 0.69 +0.0 5,714,454 - AO356_25235 0.69 +0.0 5,714,460 - AO356_25235 0.69 +0.3 5,714,471 + AO356_25235 0.70 +0.1 5,714,654 + AO356_25235 0.79 +0.0 5,714,654 + AO356_25235 0.79 +0.3 5,714,654 + AO356_25235 0.79 +0.5 5,714,655 - AO356_25235 0.79 -0.6 5,714,655 - AO356_25235 0.79 +0.2 5,714,655 - AO356_25235 0.79 +0.8 5,714,690 + AO356_25235 0.81 -0.5 5,714,690 + AO356_25235 0.81 +0.6 5,714,759 + AO356_25235 0.84 +1.0 5,714,762 + AO356_25235 0.84 +0.4 5,714,763 - AO356_25235 0.84 -0.0 5,714,873 + AO356_25235 0.90 +0.5 5,714,873 + AO356_25235 0.90 -0.3 5,714,873 + AO356_25235 0.90 -1.0 5,714,874 - AO356_25235 0.90 -0.2 5,714,996 + -0.5 5,715,740 + AO356_25245 0.68 -0.1 5,715,741 - AO356_25245 0.68 +0.3 5,715,958 + +0.0 5,715,958 + +0.8 5,715,959 - +0.5 5,715,959 - +2.3 5,715,959 - +0.6
Or see this region's nucleotide sequence