Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22510

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
5,163,099	+				-0.3
5,163,168	+				+0.5
5,163,445	-				-0.5
5,163,505	-				-0.7
5,163,553	-				-0.7
5,163,589	+				+1.4
5,163,690	+				-0.9
5,163,707	+				-1.0
5,163,713	+				-1.1
5,163,757	+				-1.2
5,163,796	+				-0.1
5,163,796	+				-1.2
5,163,798	+				+0.6
5,163,804	-				+0.8
5,163,806	-				-0.5
5,163,824	+				+1.0
5,163,824	+				+0.6
5,164,216	+		HSERO_RS22510	0.12	-1.6
5,164,293	-		HSERO_RS22510	0.18	-0.1
5,164,315	-		HSERO_RS22510	0.20	+2.7
5,164,368	+		HSERO_RS22510	0.25	-0.2
5,164,478	+		HSERO_RS22510	0.35	+1.8
5,164,643	+		HSERO_RS22510	0.50	-0.1
5,164,719	+		HSERO_RS22510	0.56	+0.5
5,164,814	-		HSERO_RS22510	0.65	-1.2
5,164,814	-		HSERO_RS22510	0.65	+0.4
5,164,852	+		HSERO_RS22510	0.68	-0.1
5,164,979	-		HSERO_RS22510	0.80	+0.9
5,165,170	-				-0.2
5,165,172	+				+0.4
5,165,230	+				+0.2
5,165,235	+				+0.2
5,165,262	-				-1.3
5,165,281	+				+2.1
5,165,289	-				-1.2
5,165,289	-				-0.3
5,165,452	-				-0.3
5,165,515	-				+0.1
5,165,786	+				+3.2
5,165,794	-		HSERO_RS22515	0.49	-0.7
5,165,887	+		HSERO_RS22515	0.63	+0.8
5,166,207	+				+0.5
5,166,207	+				-0.9