Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22030

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
5,035,606	+		HSERO_RS22025	0.57	-1.3
5,035,662	-		HSERO_RS22025	0.62	-0.6
5,036,103	-				-0.4
5,036,214	+				+0.5
5,036,222	-				-3.1
5,036,245	+				-1.5
5,036,389	+				-0.5
5,036,399	-				-1.7
5,036,461	+				-1.4
5,036,507	+				-0.1
5,036,512	+				-0.6
5,036,605	-				+0.7
5,036,614	+				-0.1
5,036,622	-				-1.1
5,036,661	+				+1.8
5,036,661	+				-0.3
5,036,705	+		HSERO_RS22030	0.12	+0.4
5,036,752	+		HSERO_RS22030	0.17	+1.1
5,036,805	+		HSERO_RS22030	0.23	+0.2
5,036,820	-		HSERO_RS22030	0.25	+0.1
5,036,834	+		HSERO_RS22030	0.26	-0.2
5,036,871	+		HSERO_RS22030	0.30	+0.7
5,037,036	-		HSERO_RS22030	0.48	-2.5
5,037,036	-		HSERO_RS22030	0.48	+1.4
5,037,170	+		HSERO_RS22030	0.63	+0.3
5,037,179	+		HSERO_RS22030	0.64	+0.2
5,037,187	-		HSERO_RS22030	0.64	-1.5
5,037,209	+		HSERO_RS22030	0.67	-0.8
5,037,278	-		HSERO_RS22030	0.74	-3.4
5,037,335	-		HSERO_RS22030	0.80	-0.4
5,037,405	-		HSERO_RS22030	0.88	-3.2
5,037,413	-		HSERO_RS22030	0.89	+0.8
5,037,517	-				-0.9
5,037,519	-				-0.2
5,037,649	+				+0.5
5,037,853	+				+1.8
5,037,891	+		HSERO_RS22035	0.12	+0.4
5,037,994	+		HSERO_RS22035	0.24	-0.5
5,038,032	-		HSERO_RS22035	0.28	-0.4
5,038,036	-		HSERO_RS22035	0.29	-1.9
5,038,118	+		HSERO_RS22035	0.38	-1.5
5,038,129	+		HSERO_RS22035	0.39	-0.1
5,038,149	-		HSERO_RS22035	0.42	-2.9
5,038,237	+		HSERO_RS22035	0.52	-0.0
5,038,268	+		HSERO_RS22035	0.55	+0.9
5,038,276	-		HSERO_RS22035	0.56	-1.6
5,038,401	-		HSERO_RS22035	0.71	+0.2
5,038,423	-		HSERO_RS22035	0.73	-2.2