Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22025

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
5,033,980	+		HSERO_RS22015	0.41	+0.7
5,034,099	-		HSERO_RS22015	0.71	+0.4
5,034,151	-		HSERO_RS22015	0.84	+0.8
5,034,167	+		HSERO_RS22015	0.88	-2.0
5,034,195	+				-1.2
5,034,236	+				+0.6
5,034,337	-				+1.0
5,034,385	-		HSERO_RS22020	0.14	-0.7
5,034,460	+		HSERO_RS22020	0.27	+0.8
5,034,509	+		HSERO_RS22020	0.35	+0.8
5,034,573	+		HSERO_RS22020	0.45	-0.6
5,034,578	-		HSERO_RS22020	0.46	-2.9
5,034,810	+		HSERO_RS22020	0.84	-1.8
5,035,064	+		HSERO_RS22025	0.12	-0.2
5,035,272	-		HSERO_RS22025	0.29	-1.5
5,035,441	+		HSERO_RS22025	0.43	-0.5
5,035,606	+		HSERO_RS22025	0.57	-1.3
5,035,662	-		HSERO_RS22025	0.62	-0.6
5,036,103	-				-0.4
5,036,214	+				+0.5
5,036,222	-				-3.1
5,036,245	+				-1.5
5,036,389	+				-0.5
5,036,399	-				-1.7
5,036,461	+				-1.4
5,036,507	+				-0.1
5,036,512	+				-0.6
5,036,605	-				+0.7
5,036,614	+				-0.1
5,036,622	-				-1.1
5,036,661	+				+1.8
5,036,661	+				-0.3
5,036,705	+		HSERO_RS22030	0.12	+0.4
5,036,752	+		HSERO_RS22030	0.17	+1.1
5,036,805	+		HSERO_RS22030	0.23	+0.2
5,036,820	-		HSERO_RS22030	0.25	+0.1
5,036,834	+		HSERO_RS22030	0.26	-0.2
5,036,871	+		HSERO_RS22030	0.30	+0.7
5,037,036	-		HSERO_RS22030	0.48	-2.5
5,037,036	-		HSERO_RS22030	0.48	+1.4