Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20720

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
4,748,853	-				+0.0
4,748,926	-		HSERO_RS20720	0.20	-2.2
4,748,997	-		HSERO_RS20720	0.30	-1.0
4,749,152	+		HSERO_RS20720	0.53	-2.6
4,749,152	+		HSERO_RS20720	0.53	-2.0
4,749,160	-		HSERO_RS20720	0.54	-1.8
4,749,165	-		HSERO_RS20720	0.55	-2.8
4,749,178	-		HSERO_RS20720	0.56	+0.8
4,749,242	+		HSERO_RS20720	0.66	-0.0
4,749,293	-		HSERO_RS20720	0.73	-2.3
4,749,340	+		HSERO_RS20720	0.80	+0.0
4,749,353	-		HSERO_RS20720	0.82	-0.2
4,749,592	-		HSERO_RS20725	0.13	-0.7
4,749,592	-		HSERO_RS20725	0.13	-1.3
4,749,616	-		HSERO_RS20725	0.15	-1.4
4,749,799	+		HSERO_RS20725	0.35	-2.7
4,749,858	+		HSERO_RS20725	0.41	+0.1
4,749,866	-		HSERO_RS20725	0.42	-0.1
4,749,906	+		HSERO_RS20725	0.47	-3.4
4,749,914	-		HSERO_RS20725	0.47	-0.9
4,750,040	-		HSERO_RS20725	0.61	-3.2
4,750,066	+		HSERO_RS20725	0.64	-2.2
4,750,074	-		HSERO_RS20725	0.65	-2.9
4,750,116	-		HSERO_RS20725	0.69	-0.9
4,750,232	+		HSERO_RS20725	0.82	-2.1
4,750,359	-				-0.9
4,750,477	+				+0.7
4,750,477	+				+0.7