Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19430

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
4,452,995	-				+1.0
4,452,995	-				+1.0
4,453,308	+		HSERO_RS19430	0.42	+0.4
4,453,316	-		HSERO_RS19430	0.44	-0.1
4,453,326	-		HSERO_RS19430	0.45	+1.4
4,453,363	-		HSERO_RS19430	0.51	-2.6
4,453,393	-		HSERO_RS19430	0.55	+1.2
4,453,408	+				-1.0
4,453,410	+		HSERO_RS19430	0.57	+0.2
4,453,418	-		HSERO_RS19430	0.59	+0.6
4,453,497	-		HSERO_RS19430	0.70	+0.2
4,453,625	+		HSERO_RS19430	0.89	-0.3
4,453,650	+				+1.5
4,453,650	+				+1.2
4,453,805	-				+0.3
4,454,112	+				+1.6
4,454,135	+				+1.0
4,454,143	-				+0.0
4,454,143	-				+0.7
4,454,143	-				+0.5
4,454,199	-		HSERO_RS19435	0.11	-0.8
4,454,279	-		HSERO_RS19435	0.16	-2.2
4,454,473	-		HSERO_RS19435	0.29	-3.2
4,454,475	+		HSERO_RS19435	0.29	-1.5
4,454,582	-		HSERO_RS19435	0.37	-1.2