Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16790

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,842,717	+		HSERO_RS16785	0.15	-0.0
3,842,770	+		HSERO_RS16785	0.21	-2.1
3,842,843	+		HSERO_RS16785	0.28	-0.6
3,842,872	-		HSERO_RS16785	0.31	-1.2
3,842,889	-		HSERO_RS16785	0.32	+0.1
3,842,899	+		HSERO_RS16785	0.33	-0.1
3,842,918	+		HSERO_RS16785	0.35	-2.5
3,843,040	-		HSERO_RS16785	0.47	-2.2
3,843,372	+				+3.2
3,843,482	+				+0.2
3,843,539	-				+0.5
3,843,714	-		HSERO_RS16790	0.19	-0.2
3,843,768	+		HSERO_RS16790	0.27	+0.5
3,843,818	-		HSERO_RS16790	0.35	+1.2
3,843,881	+		HSERO_RS16790	0.45	+0.1
3,844,160	+		HSERO_RS16790	0.88	-0.6
3,844,332	+				+0.4
3,844,334	+				-1.0
3,844,347	+				+0.2
3,844,411	-				+1.1
3,844,600	+		HSERO_RS16795	0.14	-1.4
3,844,715	-		HSERO_RS16795	0.31	-2.0
3,844,729	+		HSERO_RS16795	0.33	-2.8
3,844,729	+		HSERO_RS16795	0.33	+0.3
3,844,729	+		HSERO_RS16795	0.33	+1.1
3,844,729	+		HSERO_RS16795	0.33	+2.4
3,844,729	+		HSERO_RS16795	0.33	+0.2
3,844,737	-		HSERO_RS16795	0.34	+1.0
3,844,737	-		HSERO_RS16795	0.34	-1.1
3,844,842	+		HSERO_RS16795	0.50	-1.5
3,844,915	+		HSERO_RS16795	0.61	-1.7
3,845,010	-		HSERO_RS16795	0.75	+0.0
3,845,024	+		HSERO_RS16795	0.77	-1.2
3,845,046	-		HSERO_RS16795	0.80	+0.6
3,845,092	+		HSERO_RS16795	0.87	+0.7
3,845,129	+				-0.5